Transcript: ENSMUST00000095078.3 Lrrc8a-201

Description

leucine rich repeat containing 8A VRAC subunit A [Source:MGI Symbol;Acc:MGI:2652847]

Gene Synonyms

Lrrc8, SWELL1, ebo

Location

Chromosome 2: 30,127,734-30,153,802 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 255 domains and features, is associated with 1596 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000007476.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000095078.3	Lrrc8a-201	4301	810aa	ENSMUSP00000092690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15875	Q80WG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000113654.8	Lrrc8a-202	4194	810aa	ENSMUSP00000109284.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15875	Q80WG5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 4,301 bps, Translation length: 810 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80WG5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15875

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000095078.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000095078.3 Lrrc8a-201

Summary

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Transcript: ENSMUST00000095078.3 Lrrc8a-201

Summary

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