Mouse (GRCm39)
Description

excision repair cross-complementing rodent repair deficiency, complementation group 1 [Source:MGI Symbol;Acc:MGI:95412]

Gene Synonyms

Ercc-1

Location
About this transcript

This transcript has 5 exons, is associated with 762 variant alleles and maps to 147 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000003645.9Ercc1-2011375298aaENSMUSP00000003645.3
 
Protein coding
CCDS20898P07903 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000160369.8Ercc1-2031175245aaENSMUSP00000125655.2
 
Protein coding
CCDS52057E9PUM0 GENCODE basicTSL:1
ENSMUST00000176818.2Ercc1-209370123aaENSMUSP00000135767.2
 
Protein coding
H3BLF5 TSL:3CDS 5' and 3' incomplete
ENSMUST00000161378.2Ercc1-20546786aaENSMUSP00000135021.2
 
Nonsense mediated decay
H3BJK4 TSL:5
ENSMUST00000177486.2Ercc1-21041337aaENSMUSP00000135161.2
 
Nonsense mediated decay
H3BJX2 TSL:2CDS 5' incomplete
ENSMUST00000162992.2Ercc1-207584No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000160192.8Ercc1-2021179No protein-
 
Retained intron
-TSL:3
ENSMUST00000160909.2Ercc1-204797No protein-
 
Retained intron
-TSL:2
ENSMUST00000162197.3Ercc1-206712No protein-
 
Retained intron
-TSL:3
ENSMUST00000176723.2Ercc1-208421No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 5, Coding exons: 2, Transcript length: 413 bps, Translation length: 37 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000177486.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.