Mouse (GRCm39)
Description

excision repair cross-complementing rodent repair deficiency, complementation group 1 [Source:MGI Symbol;Acc:MGI:95412]

Gene Synonyms

Ercc-1

Location
About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 1098 variant alleles and maps to 153 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000003645.9Ercc1-2011375298aaENSMUSP00000003645.3
 
Protein coding
CCDS20898P07903 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000160369.8Ercc1-2031175245aaENSMUSP00000125655.2
 
Protein coding
CCDS52057E9PUM0 GENCODE basicTSL:1
ENSMUST00000176818.2Ercc1-209370123aaENSMUSP00000135767.2
 
Protein coding
H3BLF5 TSL:3CDS 5' and 3' incomplete
ENSMUST00000161378.2Ercc1-20546786aaENSMUSP00000135021.2
 
Nonsense mediated decay
H3BJK4 TSL:5
ENSMUST00000177486.2Ercc1-21041337aaENSMUSP00000135161.2
 
Nonsense mediated decay
H3BJX2 TSL:2CDS 5' incomplete
ENSMUST00000162992.2Ercc1-207584No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000160192.8Ercc1-2021179No protein-
 
Retained intron
-TSL:3
ENSMUST00000160909.2Ercc1-204797No protein-
 
Retained intron
-TSL:2
ENSMUST00000162197.3Ercc1-206712No protein-
 
Retained intron
-TSL:3
ENSMUST00000176723.2Ercc1-208421No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,175 bps, Translation length: 245 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52057

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000160369.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.