Mouse (GRCm39)
Description

polynucleotide kinase 3'- phosphatase [Source:MGI Symbol;Acc:MGI:1891698]

Gene Synonyms

1810009G08Rik, PNK

Location
About this transcript

This transcript has 16 exons, is annotated with 20 domains and features, is associated with 1022 variant alleles and maps to 282 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000003044.14Pnkp-2012184522aaENSMUSP00000003044.8
 
Protein coding
CCDS39945G5E8N7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000107876.8Pnkp-2031770522aaENSMUSP00000103508.2
 
Protein coding
CCDS39945G5E8N7 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000098478.7Pnkp-2021550486aaENSMUSP00000096078.4
 
Protein coding
CCDS71955E9Q9A5 GENCODE basicTSL:1
ENSMUST00000208666.2Pnkp-217765255aaENSMUSP00000147012.2
 
Protein coding
A0A140LIZ1 TSL:5CDS 5' and 3' incomplete
ENSMUST00000200892.2Pnkp-213454151aaENSMUSP00000144163.2
 
Protein coding
A0A0J9YUF9 TSL:2CDS 5' and 3' incomplete
ENSMUST00000154968.2Pnkp-21121334aaENSMUSP00000115504.4
 
Protein coding
D3YZV7 TSL:5CDS 3' incomplete
ENSMUST00000202646.4Pnkp-215444148aaENSMUSP00000144484.2
 
Non stop decay
A0A0J9YV48 TSL:3CDS 5' incomplete
ENSMUST00000155050.5Pnkp-212167459aaENSMUSP00000144663.2
 
Nonsense mediated decay
A0A0J9YVH5 TSL:5
ENSMUST00000123015.8Pnkp-2041573180aaENSMUSP00000143862.2
 
Nonsense mediated decay
A0A0J9YTV1 TSL:1
ENSMUST00000201882.4Pnkp-2141497426aaENSMUSP00000144690.2
 
Nonsense mediated decay
A0A0J9YVJ6 TSL:5
ENSMUST00000139003.8Pnkp-20799053aaENSMUSP00000143904.2
 
Nonsense mediated decay
A0A0J9YUT2 TSL:5
ENSMUST00000124168.8Pnkp-20593353aaENSMUSP00000144330.2
 
Nonsense mediated decay
A0A0J9YUT2 TSL:5
ENSMUST00000208385.2Pnkp-21662480aaENSMUSP00000147079.2
 
Nonsense mediated decay
A0A140LJ53 TSL:5CDS 5' incomplete
ENSMUST00000145850.8Pnkp-2091975No protein-
 
Retained intron
-TSL:1
ENSMUST00000152747.3Pnkp-210860No protein-
 
Retained intron
-TSL:5
ENSMUST00000126860.6Pnkp-206672No protein-
 
Retained intron
-TSL:5
ENSMUST00000144669.3Pnkp-208455No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,184 bps, Translation length: 522 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39945

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000003044.14

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.