Description

Fas death domain-associated protein [Source:MGI Symbol;Acc:MGI:1197015]

Location
About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 6 variations and maps to 6 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Daxx-001ENSMUST000001700752673740aaENSMUSP00000128504
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28633A1A558 G3UWI4 G3UWJ9
Q3UKR0 Q5XLB0 Q5XW54
Q5XW56 Q5XW57 Q5XW58
NM_001199733
NP_001186662
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Daxx-002ENSMUST000000794212580740aaENSMUSP00000078390
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28633A1A558 G3UWI4 G3UWJ9
Q3UKR0 Q5XLB0 Q5XW54
Q5XW56 Q5XW57 Q5XW58
NM_007829
NP_031855
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Daxx-003ENSMUST000001741462424740aaENSMUSP00000134158
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28633A1A558 G3UWI4 G3UWJ9
Q3UKR0 Q5XLB0 Q5XW54
Q5XW56 Q5XW57 Q5XW58
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Daxx-004ENSMUST000001745412325702aaENSMUSP00000133552
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UWI4 G3UWJ9 G3UX50
Q5XLB0 Q5XW57 Q5XW58
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Daxx-010ENSMUST00000173626715167aaENSMUSP00000133303
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UWI4 G3UWJ9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Daxx-009ENSMUST00000173028477137aaENSMUSP00000133319
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UWJ9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Daxx-005ENSMUST00000173279601No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Daxx-007ENSMUST00000174646558No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Daxx-008ENSMUST000001728591055No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 3 Coding exons: 2 Transcript length: 477 bps Translation length: 137 residues

Transcript Support Level (TSL)

TSL:3

Ensembl version

ENSMUST00000173028.3

Type

Putative protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays