Description

motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]

Location
About this transcript

This transcript has 3 exons, is annotated with 19 domains and features, is associated with 13 variations and maps to 17 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Mnx1-001ENSMUST000001655122245404aaENSMUSP00000129503
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19150A2RSX2 NM_019944
NP_064328
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
Mnx1-201ENSMUST000000016082018404aaENSMUSP00000001608
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9QZW9 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 3 Coding exons: 3 Transcript length: 2,245 bps Translation length: 404 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19150

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENSMUST00000165512.3

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays