Description

motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]

Location
About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 13 variations and maps to 17 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Mnx1-001ENSMUST000001655122245404aaENSMUSP00000129503
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19150A2RSX2 NM_019944
NP_064328
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Mnx1-201ENSMUST000000016082018404aaENSMUSP00000001608
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9QZW9 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 3 Coding exons: 3 Transcript length: 2,018 bps Translation length: 404 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9QZW9

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENSMUST00000001608.7

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays