Mouse (GRCm39)
Description

polypeptide N-acetylgalactosaminyltransferase 1 [Source:MGI Symbol;Acc:MGI:894693]

Gene Synonyms

ppGaNTase-T1

Location
About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 3983 variant alleles and maps to 330 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000170243.8Galnt1-2064108559aaENSMUSP00000132142.2
 
Protein coding
CCDS29100O08912 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000000430.14Galnt1-2013977559aaENSMUSP00000000430.8
 
Protein coding
CCDS29100O08912 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000178605.2Galnt1-2083796559aaENSMUSP00000137427.2
 
Protein coding
CCDS29100O08912 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000164998.8Galnt1-203980142aaENSMUSP00000132411.2
 
Protein coding
E9Q0U0 TSL:5CDS 3' incomplete
ENSMUST00000164066.2Galnt1-20272078aaENSMUSP00000130238.2
 
Nonsense mediated decay
F6PYE1 TSL:3CDS 5' incomplete
ENSMUST00000171583.2Galnt1-20767862aaENSMUSP00000131755.2
 
Nonsense mediated decay
E9PVK6 TSL:3
ENSMUST00000169474.2Galnt1-204818No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000170191.2Galnt1-205798No protein-
 
Protein coding CDS not defined
-TSL:5
Statistics

Exons: 13, Coding exons: 11, Transcript length: 4,108 bps, Translation length: 559 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08912

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29100

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000170243.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.