Transcript: ENSMUST00000381120.1 Gm16277-210

Description

predicted gene 16277 [Source:MGI Symbol;Acc:MGI:3826543]

Location

Chromosome 19: 58,219,525-58,224,899 forward strand.

About this transcript

This transcript has 4 exons, is associated with 733 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000087002.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000381112.1	Gm16277-202	1573	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000381120.1	Gm16277-210	1640	No protein	-	lncRNA	-
ENSMUST00000381128.1	Gm16277-218	1587	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381113.1	Gm16277-203	1505	No protein	-	lncRNA	-
ENSMUST00000381119.1	Gm16277-209	1484	No protein	-	lncRNA	-
ENSMUST00000381124.1	Gm16277-214	1471	No protein	-	lncRNA	-
ENSMUST00000381121.1	Gm16277-211	1440	No protein	-	lncRNA	-
ENSMUST00000381117.1	Gm16277-207	1410	No protein	-	lncRNA	-
ENSMUST00000381118.1	Gm16277-208	1401	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381127.1	Gm16277-217	1374	No protein	-	lncRNA	-
ENSMUST00000381123.1	Gm16277-213	1327	No protein	-	lncRNA	-
ENSMUST00000381114.1	Gm16277-204	1238	No protein	-	lncRNA	-
ENSMUST00000143595.3	Gm16277-201	1217	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000381125.1	Gm16277-215	1192	No protein	-	lncRNA	-
ENSMUST00000381122.1	Gm16277-212	1183	No protein	-	lncRNA	-
ENSMUST00000381115.1	Gm16277-205	1179	No protein	-	lncRNA	-
ENSMUST00000381126.1	Gm16277-216	1108	No protein	-	lncRNA	-
ENSMUST00000381116.1	Gm16277-206	1013	No protein	-	lncRNA	-
ENSMUST00000381131.1	Gm16277-221	570	No protein	-	lncRNA	-
ENSMUST00000381129.1	Gm16277-219	476	No protein	-	lncRNA	-
ENSMUST00000381130.1	Gm16277-220	411	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,640 bps,

Version

ENSMUST00000381120.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000381120.1 Gm16277-210

Summary

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Transcript: ENSMUST00000381120.1 Gm16277-210

Summary

About Us

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