Transcript: ENSMUST00000379173.1 Gm48500-208

Description

predicted gene, 48500 [Source:MGI Symbol;Acc:MGI:6098026]

Location

Chromosome 13: 60,621,252-60,628,184 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1064 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000114566.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000225097.2	Gm48500-202	1568	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379173.1	Gm48500-208	1570	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000224075.2	Gm48500-201	1478	No protein	-	lncRNA	-
ENSMUST00000379169.1	Gm48500-204	1472	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379176.1	Gm48500-211	1414	No protein	-	lncRNA	-
ENSMUST00000379172.1	Gm48500-207	1311	No protein	-	lncRNA	-
ENSMUST00000379174.1	Gm48500-209	1279	No protein	-	lncRNA	-
ENSMUST00000379170.1	Gm48500-205	1141	No protein	-	lncRNA	-
ENSMUST00000379175.1	Gm48500-210	1054	No protein	-	lncRNA	-
ENSMUST00000379171.1	Gm48500-206	1019	No protein	-	lncRNA	-
ENSMUST00000379183.1	Gm48500-218	848	No protein	-	lncRNA	-
ENSMUST00000379181.1	Gm48500-216	717	No protein	-	lncRNA	-
ENSMUST00000379182.1	Gm48500-217	686	No protein	-	lncRNA	-
ENSMUST00000379180.1	Gm48500-215	683	No protein	-	lncRNA	-
ENSMUST00000379177.1	Gm48500-212	638	No protein	-	lncRNA	-
ENSMUST00000242187.1	Gm48500-203	536	No protein	-	lncRNA	-
ENSMUST00000379179.1	Gm48500-214	442	No protein	-	lncRNA	-
ENSMUST00000379178.1	Gm48500-213	433	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,570 bps,

Version

ENSMUST00000379173.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000379173.1 Gm48500-208

Summary

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Transcript: ENSMUST00000379173.1 Gm48500-208

Summary

About Us

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