Transcript: ENSMUST00000378785.1

Description

novel transcript

Location

Chromosome 11: 110,424,542-110,477,070 forward strand.

About this transcript

This transcript has 5 exons, is associated with 3750 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000143726.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000378779.1	-	727	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000378785.1	-	1331	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000378789.1	-	1112	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000378780.1	-	1035	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000378795.1	-	977	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000378787.1	-	860	No protein	-	lncRNA	-
ENSMUST00000378794.1	-	855	No protein	-	lncRNA	-
ENSMUST00000378781.1	-	787	No protein	-	lncRNA	-
ENSMUST00000378793.1	-	730	No protein	-	lncRNA	-
ENSMUST00000378784.1	-	682	No protein	-	lncRNA	-
ENSMUST00000378790.1	-	659	No protein	-	lncRNA	-
ENSMUST00000378782.1	-	622	No protein	-	lncRNA	-
ENSMUST00000378792.1	-	613	No protein	-	lncRNA	-
ENSMUST00000378783.1	-	606	No protein	-	lncRNA	-
ENSMUST00000378786.1	-	585	No protein	-	lncRNA	-
ENSMUST00000378791.1	-	567	No protein	-	lncRNA	-
ENSMUST00000378797.1	-	562	No protein	-	lncRNA	-
ENSMUST00000378796.1	-	472	No protein	-	lncRNA	-
ENSMUST00000378788.1	-	438	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,331 bps,

Version

ENSMUST00000378785.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000378785.1

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Transcript: ENSMUST00000378785.1

Summary

About Us

Get help

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