Transcript: ENSMUST00000375635.1 Gm56529-237

Description

predicted gene, 56529 [Source:MGI Symbol;Acc:MGI:7336972]

Location

Chromosome 12: 111,460,271-111,467,281 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1017 variant alleles and maps to 7 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000120091.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000375836.1	Gm56529-251	484	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000375635.1	Gm56529-237	3139	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375628.1	Gm56529-230	2589	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241310.2	Gm56529-203	2455	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000221429.3	Gm56529-202	1915	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000375595.1	Gm56529-206	1777	No protein	-	lncRNA	-
ENSMUST00000375634.1	Gm56529-236	1755	No protein	-	lncRNA	-
ENSMUST00000375594.1	Gm56529-205	1723	No protein	-	lncRNA	-
ENSMUST00000375626.1	Gm56529-228	1658	No protein	-	lncRNA	-
ENSMUST00000375633.1	Gm56529-235	1563	No protein	-	lncRNA	-
ENSMUST00000375625.1	Gm56529-227	1536	No protein	-	lncRNA	-
ENSMUST00000375833.1	Gm56529-248	1361	No protein	-	lncRNA	-
ENSMUST00000246597.1	Gm56529-204	1272	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375627.1	Gm56529-229	1154	No protein	-	lncRNA	-
ENSMUST00000375829.1	Gm56529-244	1139	No protein	-	lncRNA	-
ENSMUST00000375637.1	Gm56529-239	1135	No protein	-	lncRNA	-
ENSMUST00000375629.1	Gm56529-231	1126	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375600.1	Gm56529-210	1027	No protein	-	lncRNA	-
ENSMUST00000375636.1	Gm56529-238	1002	No protein	-	lncRNA	-
ENSMUST00000375632.1	Gm56529-234	999	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375621.1	Gm56529-223	927	No protein	-	lncRNA	-
ENSMUST00000375639.1	Gm56529-241	907	No protein	-	lncRNA	-
ENSMUST00000375596.1	Gm56529-207	894	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375609.1	Gm56529-219	889	No protein	-	lncRNA	-
ENSMUST00000375831.1	Gm56529-246	849	No protein	-	lncRNA	-
ENSMUST00000375604.1	Gm56529-214	828	No protein	-	lncRNA	-
ENSMUST00000375608.1	Gm56529-218	743	No protein	-	lncRNA	-
ENSMUST00000375638.1	Gm56529-240	709	No protein	-	lncRNA	-
ENSMUST00000375622.1	Gm56529-224	695	No protein	-	lncRNA	-
ENSMUST00000375603.1	Gm56529-213	693	No protein	-	lncRNA	-
ENSMUST00000375624.1	Gm56529-226	690	No protein	-	lncRNA	-
ENSMUST00000375602.1	Gm56529-212	688	No protein	-	lncRNA	-
ENSMUST00000375832.1	Gm56529-247	677	No protein	-	lncRNA	-
ENSMUST00000375598.1	Gm56529-209	675	No protein	-	lncRNA	-
ENSMUST00000375616.1	Gm56529-221	664	No protein	-	lncRNA	-
ENSMUST00000375601.1	Gm56529-211	622	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375597.1	Gm56529-208	613	No protein	-	lncRNA	-
ENSMUST00000375615.1	Gm56529-220	605	No protein	-	lncRNA	-
ENSMUST00000375618.1	Gm56529-222	595	No protein	-	lncRNA	-
ENSMUST00000375830.1	Gm56529-245	594	No protein	-	lncRNA	-
ENSMUST00000375606.1	Gm56529-216	581	No protein	-	lncRNA	-
ENSMUST00000375641.1	Gm56529-243	579	No protein	-	lncRNA	-
ENSMUST00000375631.1	Gm56529-233	570	No protein	-	lncRNA	-
ENSMUST00000375605.1	Gm56529-215	563	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375607.1	Gm56529-217	551	No protein	-	lncRNA	-
ENSMUST00000375834.1	Gm56529-249	523	No protein	-	lncRNA	-
ENSMUST00000375837.1	Gm56529-252	502	No protein	-	lncRNA	-
ENSMUST00000375630.1	Gm56529-232	500	No protein	-	lncRNA	-
ENSMUST00000375623.1	Gm56529-225	421	No protein	-	lncRNA	-
ENSMUST00000375835.1	Gm56529-250	391	No protein	-	lncRNA	-
ENSMUST00000220837.2	Gm56529-201	390	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000375640.1	Gm56529-242	338	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,139 bps,

Version

ENSMUST00000375635.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000375635.1 Gm56529-237

Summary

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Transcript: ENSMUST00000375635.1 Gm56529-237

Summary

About Us

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