Transcript: ENSMUST00000367162.1 Gm71569-273

Description

predicted gene, 71569 [Source:MGI Symbol;Acc:MGI:7825911]

Location

Chromosome 1: 21,355,462-21,395,963 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 4585 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121505.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000367149.1	Gm71569-261	1261	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000367162.1	Gm71569-273	1787	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367176.1	Gm71569-287	1735	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367150.1	Gm71569-262	1699	No protein	-	lncRNA	-
ENSMUST00000367177.1	Gm71569-288	1686	No protein	-	lncRNA	-
ENSMUST00000367172.1	Gm71569-283	1680	No protein	-	lncRNA	-
ENSMUST00000246596.1	Gm71569-246	1614	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000246206.1	Gm71569-240	1606	No protein	-	lncRNA	-
ENSMUST00000243358.1	Gm71569-215	1563	No protein	-	lncRNA	-
ENSMUST00000245555.2	Gm71569-231	1551	No protein	-	lncRNA	-
ENSMUST00000367215.1	Gm71569-323	1543	No protein	-	lncRNA	-
ENSMUST00000082032.15	Gm71569-201	1532	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000246446.1	Gm71569-245	1530	No protein	-	lncRNA	-
ENSMUST00000245753.1	Gm71569-233	1502	No protein	-	lncRNA	-
ENSMUST00000367206.1	Gm71569-315	1500	No protein	-	lncRNA	-
ENSMUST00000246748.1	Gm71569-253	1489	No protein	-	lncRNA	-
ENSMUST00000243612.2	Gm71569-216	1453	No protein	-	lncRNA	-
ENSMUST00000245344.1	Gm71569-229	1445	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000246105.1	Gm71569-239	1428	No protein	-	lncRNA	-
ENSMUST00000246878.1	Gm71569-257	1425	No protein	-	lncRNA	-
ENSMUST00000367228.1	Gm71569-335	1425	No protein	-	lncRNA	-
ENSMUST00000367197.1	Gm71569-306	1423	No protein	-	lncRNA	-
ENSMUST00000241047.2	Gm71569-204	1396	No protein	-	lncRNA	-
ENSMUST00000243839.1	Gm71569-218	1384	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367157.1	Gm71569-269	1371	No protein	-	lncRNA	-
ENSMUST00000367160.1	Gm71569-271	1366	No protein	-	lncRNA	-
ENSMUST00000241789.1	Gm71569-209	1365	No protein	-	lncRNA	-
ENSMUST00000367230.1	Gm71569-337	1362	No protein	-	lncRNA	-
ENSMUST00000246822.1	Gm71569-256	1355	No protein	-	lncRNA	-
ENSMUST00000367226.1	Gm71569-333	1345	No protein	-	lncRNA	-
ENSMUST00000246434.1	Gm71569-244	1341	No protein	-	lncRNA	-
ENSMUST00000367227.1	Gm71569-334	1333	No protein	-	lncRNA	-
ENSMUST00000367152.1	Gm71569-264	1316	No protein	-	lncRNA	-
ENSMUST00000242048.2	Gm71569-211	1311	No protein	-	lncRNA	-
ENSMUST00000367168.1	Gm71569-279	1308	No protein	-	lncRNA	-
ENSMUST00000241441.2	Gm71569-206	1304	No protein	-	lncRNA	-
ENSMUST00000247720.1	Gm71569-260	1294	No protein	-	lncRNA	-
ENSMUST00000367225.1	Gm71569-332	1292	No protein	-	lncRNA	-
ENSMUST00000246636.2	Gm71569-248	1284	No protein	-	lncRNA	-
ENSMUST00000367180.1	Gm71569-291	1276	No protein	-	lncRNA	-
ENSMUST00000246003.2	Gm71569-236	1275	No protein	-	lncRNA	-
ENSMUST00000245399.2	Gm71569-230	1274	No protein	-	lncRNA	-
ENSMUST00000246012.1	Gm71569-237	1271	No protein	-	lncRNA	-
ENSMUST00000246680.1	Gm71569-250	1268	No protein	-	lncRNA	-
ENSMUST00000367153.1	Gm71569-265	1268	No protein	-	lncRNA	-
ENSMUST00000367203.1	Gm71569-312	1264	No protein	-	lncRNA	-
ENSMUST00000367194.1	Gm71569-303	1260	No protein	-	lncRNA	-
ENSMUST00000367178.1	Gm71569-289	1255	No protein	-	lncRNA	-
ENSMUST00000367187.1	Gm71569-297	1254	No protein	-	lncRNA	-
ENSMUST00000245916.2	Gm71569-235	1251	No protein	-	lncRNA	-
ENSMUST00000367205.1	Gm71569-314	1247	No protein	-	lncRNA	-
ENSMUST00000367164.1	Gm71569-275	1236	No protein	-	lncRNA	-
ENSMUST00000179730.3	Gm71569-202	1231	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000367224.1	Gm71569-331	1225	No protein	-	lncRNA	-
ENSMUST00000241363.2	Gm71569-205	1224	No protein	-	lncRNA	-
ENSMUST00000246343.1	Gm71569-243	1220	No protein	-	lncRNA	-
ENSMUST00000245791.2	Gm71569-234	1214	No protein	-	lncRNA	-
ENSMUST00000246256.2	Gm71569-242	1210	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367202.1	Gm71569-311	1209	No protein	-	lncRNA	-
ENSMUST00000367179.1	Gm71569-290	1207	No protein	-	lncRNA	-
ENSMUST00000367229.1	Gm71569-336	1207	No protein	-	lncRNA	-
ENSMUST00000246770.1	Gm71569-254	1204	No protein	-	lncRNA	-
ENSMUST00000367181.1	Gm71569-292	1201	No protein	-	lncRNA	-
ENSMUST00000243193.2	Gm71569-213	1197	No protein	-	lncRNA	-
ENSMUST00000246788.1	Gm71569-255	1195	No protein	-	lncRNA	-
ENSMUST00000241819.2	Gm71569-210	1193	No protein	-	lncRNA	-
ENSMUST00000367208.1	Gm71569-317	1188	No protein	-	lncRNA	-
ENSMUST00000367191.1	Gm71569-301	1186	No protein	-	lncRNA	-
ENSMUST00000367210.1	Gm71569-319	1183	No protein	-	lncRNA	-
ENSMUST00000367190.1	Gm71569-300	1182	No protein	-	lncRNA	-
ENSMUST00000367213.1	Gm71569-321	1179	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244213.2	Gm71569-220	1170	No protein	-	lncRNA	-
ENSMUST00000367188.1	Gm71569-298	1161	No protein	-	lncRNA	-
ENSMUST00000367171.1	Gm71569-282	1158	No protein	-	lncRNA	-
ENSMUST00000367212.1	Gm71569-320	1138	No protein	-	lncRNA	-
ENSMUST00000367207.1	Gm71569-316	1135	No protein	-	lncRNA	-
ENSMUST00000367198.1	Gm71569-307	1129	No protein	-	lncRNA	-
ENSMUST00000367155.1	Gm71569-267	1127	No protein	-	lncRNA	-
ENSMUST00000244398.2	Gm71569-222	1126	No protein	-	lncRNA	-
ENSMUST00000367158.1	Gm71569-270	1125	No protein	-	lncRNA	-
ENSMUST00000367161.1	Gm71569-272	1124	No protein	-	lncRNA	-
ENSMUST00000246693.2	Gm71569-252	1119	No protein	-	lncRNA	-
ENSMUST00000367193.1	Gm71569-302	1117	No protein	-	lncRNA	-
ENSMUST00000246688.2	Gm71569-251	1111	No protein	-	lncRNA	-
ENSMUST00000367214.1	Gm71569-322	1102	No protein	-	lncRNA	-
ENSMUST00000246614.2	Gm71569-247	1098	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367199.1	Gm71569-308	1097	No protein	-	lncRNA	-
ENSMUST00000246039.1	Gm71569-238	1093	No protein	-	lncRNA	-
ENSMUST00000241727.1	Gm71569-208	1086	No protein	-	lncRNA	-
ENSMUST00000244754.1	Gm71569-223	1083	No protein	-	lncRNA	-
ENSMUST00000245336.2	Gm71569-228	1081	No protein	-	lncRNA	-
ENSMUST00000367185.1	Gm71569-295	1080	No protein	-	lncRNA	-
ENSMUST00000245119.1	Gm71569-225	1079	No protein	-	lncRNA	-
ENSMUST00000367196.1	Gm71569-305	1078	No protein	-	lncRNA	-
ENSMUST00000244179.1	Gm71569-219	1073	No protein	-	lncRNA	-
ENSMUST00000367154.1	Gm71569-266	1069	No protein	-	lncRNA	-
ENSMUST00000247575.1	Gm71569-259	1066	No protein	-	lncRNA	-
ENSMUST00000246937.1	Gm71569-258	1063	No protein	-	lncRNA	-
ENSMUST00000367165.1	Gm71569-276	1061	No protein	-	lncRNA	-
ENSMUST00000367183.1	Gm71569-294	1054	No protein	-	lncRNA	-
ENSMUST00000367163.1	Gm71569-274	1053	No protein	-	lncRNA	-
ENSMUST00000367156.1	Gm71569-268	1052	No protein	-	lncRNA	-
ENSMUST00000367200.1	Gm71569-309	1051	No protein	-	lncRNA	-
ENSMUST00000367166.1	Gm71569-277	1039	No protein	-	lncRNA	-
ENSMUST00000367169.1	Gm71569-280	1039	No protein	-	lncRNA	-
ENSMUST00000241044.2	Gm71569-203	1038	No protein	-	lncRNA	-
ENSMUST00000246249.1	Gm71569-241	1033	No protein	-	lncRNA	-
ENSMUST00000243699.1	Gm71569-217	1028	No protein	-	lncRNA	-
ENSMUST00000245288.1	Gm71569-226	1014	No protein	-	lncRNA	-
ENSMUST00000367204.1	Gm71569-313	1011	No protein	-	lncRNA	-
ENSMUST00000367218.1	Gm71569-326	1009	No protein	-	lncRNA	-
ENSMUST00000367231.1	Gm71569-338	1008	No protein	-	lncRNA	-
ENSMUST00000367167.1	Gm71569-278	1003	No protein	-	lncRNA	-
ENSMUST00000367209.1	Gm71569-318	1002	No protein	-	lncRNA	-
ENSMUST00000367189.1	Gm71569-299	998	No protein	-	lncRNA	-
ENSMUST00000367186.1	Gm71569-296	997	No protein	-	lncRNA	-
ENSMUST00000245721.2	Gm71569-232	989	No protein	-	lncRNA	-
ENSMUST00000246675.2	Gm71569-249	976	No protein	-	lncRNA	-
ENSMUST00000244238.1	Gm71569-221	964	No protein	-	lncRNA	-
ENSMUST00000245298.2	Gm71569-227	957	No protein	-	lncRNA	-
ENSMUST00000367217.1	Gm71569-325	952	No protein	-	lncRNA	-
ENSMUST00000242183.2	Gm71569-212	947	No protein	-	lncRNA	-
ENSMUST00000367170.1	Gm71569-281	945	No protein	-	lncRNA	-
ENSMUST00000244999.1	Gm71569-224	944	No protein	-	lncRNA	-
ENSMUST00000367182.1	Gm71569-293	940	No protein	-	lncRNA	-
ENSMUST00000241448.1	Gm71569-207	938	No protein	-	lncRNA	-
ENSMUST00000367195.1	Gm71569-304	926	No protein	-	lncRNA	-
ENSMUST00000243335.1	Gm71569-214	911	No protein	-	lncRNA	-
ENSMUST00000367201.1	Gm71569-310	828	No protein	-	lncRNA	-
ENSMUST00000367232.1	Gm71569-339	790	No protein	-	lncRNA	-
ENSMUST00000367233.1	Gm71569-340	768	No protein	-	lncRNA	-
ENSMUST00000367174.1	Gm71569-285	761	No protein	-	lncRNA	-
ENSMUST00000367234.1	Gm71569-341	749	No protein	-	lncRNA	-
ENSMUST00000367236.1	Gm71569-343	736	No protein	-	lncRNA	-
ENSMUST00000367216.1	Gm71569-324	673	No protein	-	lncRNA	-
ENSMUST00000367151.1	Gm71569-263	661	No protein	-	lncRNA	-
ENSMUST00000367175.1	Gm71569-286	659	No protein	-	lncRNA	-
ENSMUST00000367220.1	Gm71569-328	636	No protein	-	lncRNA	-
ENSMUST00000367221.1	Gm71569-329	629	No protein	-	lncRNA	-
ENSMUST00000367222.1	Gm71569-330	626	No protein	-	lncRNA	-
ENSMUST00000367173.1	Gm71569-284	587	No protein	-	lncRNA	-
ENSMUST00000367219.1	Gm71569-327	551	No protein	-	lncRNA	-
ENSMUST00000367235.1	Gm71569-342	509	No protein	-	lncRNA	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,787 bps,

Version

ENSMUST00000367162.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000367162.1 Gm71569-273

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSMUST00000367162.1 Gm71569-273

Summary

About Us

Get help

Our sister sites

Follow us