Transcript: ENSMUST00000357328.1 Gm57295-216

Description

predicted gene, 57295 [Source:MGI Symbol;Acc:MGI:7338503]

Location

Chromosome 5: 109,930,095-109,944,435 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1931 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000120227.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000357058.1	Gm57295-207	820	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000357328.1	Gm57295-216	2294	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241983.2	Gm57295-202	1527	No protein	-	lncRNA	-
ENSMUST00000357327.1	Gm57295-215	1017	No protein	-	lncRNA	-
ENSMUST00000357332.1	Gm57295-220	977	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357326.1	Gm57295-214	954	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357331.1	Gm57295-219	947	No protein	-	lncRNA	-
ENSMUST00000357329.1	Gm57295-217	913	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357322.1	Gm57295-210	854	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357324.1	Gm57295-212	838	No protein	-	lncRNA	-
ENSMUST00000357325.1	Gm57295-213	837	No protein	-	lncRNA	-
ENSMUST00000245605.2	Gm57295-205	797	No protein	-	lncRNA	-
ENSMUST00000196262.3	Gm57295-201	692	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000357330.1	Gm57295-218	689	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357337.1	Gm57295-225	685	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357334.1	Gm57295-222	684	No protein	-	lncRNA	-
ENSMUST00000357336.1	Gm57295-224	674	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242486.1	Gm57295-203	665	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357335.1	Gm57295-223	663	No protein	-	lncRNA	-
ENSMUST00000242526.2	Gm57295-204	649	No protein	-	lncRNA	-
ENSMUST00000357333.1	Gm57295-221	639	No protein	-	lncRNA	-
ENSMUST00000245832.2	Gm57295-206	623	No protein	-	lncRNA	-
ENSMUST00000357338.1	Gm57295-226	463	No protein	-	lncRNA	-
ENSMUST00000357323.1	Gm57295-211	448	No protein	-	lncRNA	-
ENSMUST00000357320.1	Gm57295-208	426	No protein	-	lncRNA	-
ENSMUST00000357321.1	Gm57295-209	419	No protein	-	lncRNA	-
ENSMUST00000357339.1	Gm57295-227	352	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000357340.1	Gm57295-228	236	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,294 bps,

Version

ENSMUST00000357328.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000357328.1 Gm57295-216

Summary

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Transcript: ENSMUST00000357328.1 Gm57295-216

Summary

About Us

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