Transcript: ENSMUST00000355859.1 B230209E15Rik-211

Description

RIKEN cDNA B230209E15 gene [Source:MGI Symbol;Acc:MGI:2442668]

Location

Chromosome 7: 61,179,596-61,265,107 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 5916 variant alleles and maps to 52 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000109006.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000355852.1	B230209E15Rik-204	1778	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355859.1	B230209E15Rik-211	1996	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355857.1	B230209E15Rik-209	1946	No protein	-	lncRNA	-
ENSMUST00000355856.1	B230209E15Rik-208	1942	No protein	-	lncRNA	-
ENSMUST00000355861.1	B230209E15Rik-213	1926	No protein	-	lncRNA	-
ENSMUST00000355860.1	B230209E15Rik-212	1746	No protein	-	lncRNA	-
ENSMUST00000355865.1	B230209E15Rik-217	1712	No protein	-	lncRNA	-
ENSMUST00000355862.1	B230209E15Rik-214	1702	No protein	-	lncRNA	-
ENSMUST00000355854.1	B230209E15Rik-206	1681	No protein	-	lncRNA	-
ENSMUST00000355863.1	B230209E15Rik-215	1678	No protein	-	lncRNA	-
ENSMUST00000209115.3	B230209E15Rik-201	1663	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000355858.1	B230209E15Rik-210	1652	No protein	-	lncRNA	-
ENSMUST00000355864.1	B230209E15Rik-216	1649	No protein	-	lncRNA	-
ENSMUST00000355885.1	B230209E15Rik-235	1633	No protein	-	lncRNA	-
ENSMUST00000355869.1	B230209E15Rik-220	1593	No protein	-	lncRNA	-
ENSMUST00000355875.1	B230209E15Rik-226	1573	No protein	-	lncRNA	-
ENSMUST00000355886.1	B230209E15Rik-236	1527	No protein	-	lncRNA	-
ENSMUST00000355853.1	B230209E15Rik-205	1513	No protein	-	lncRNA	-
ENSMUST00000355887.1	B230209E15Rik-237	1509	No protein	-	lncRNA	-
ENSMUST00000211785.4	B230209E15Rik-202	1499	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000246926.2	B230209E15Rik-203	1492	No protein	-	lncRNA	-
ENSMUST00000355855.1	B230209E15Rik-207	1490	No protein	-	lncRNA	-
ENSMUST00000355889.1	B230209E15Rik-239	1490	No protein	-	lncRNA	-
ENSMUST00000355892.1	B230209E15Rik-242	1353	No protein	-	lncRNA	-
ENSMUST00000355888.1	B230209E15Rik-238	1339	No protein	-	lncRNA	-
ENSMUST00000355871.1	B230209E15Rik-222	1291	No protein	-	lncRNA	-
ENSMUST00000355876.1	B230209E15Rik-227	1287	No protein	-	lncRNA	-
ENSMUST00000355873.1	B230209E15Rik-224	1283	No protein	-	lncRNA	-
ENSMUST00000355870.1	B230209E15Rik-221	1218	No protein	-	lncRNA	-
ENSMUST00000355883.1	B230209E15Rik-233	1174	No protein	-	lncRNA	-
ENSMUST00000355878.1	B230209E15Rik-228	1101	No protein	-	lncRNA	-
ENSMUST00000355879.1	B230209E15Rik-229	1082	No protein	-	lncRNA	-
ENSMUST00000355891.1	B230209E15Rik-241	1066	No protein	-	lncRNA	-
ENSMUST00000355872.1	B230209E15Rik-223	1028	No protein	-	lncRNA	-
ENSMUST00000355882.1	B230209E15Rik-232	955	No protein	-	lncRNA	-
ENSMUST00000355893.1	B230209E15Rik-243	862	No protein	-	lncRNA	-
ENSMUST00000355868.1	B230209E15Rik-219	822	No protein	-	lncRNA	-
ENSMUST00000355881.1	B230209E15Rik-231	732	No protein	-	lncRNA	-
ENSMUST00000355880.1	B230209E15Rik-230	728	No protein	-	lncRNA	-
ENSMUST00000355890.1	B230209E15Rik-240	702	No protein	-	lncRNA	-
ENSMUST00000355874.1	B230209E15Rik-225	621	No protein	-	lncRNA	-
ENSMUST00000355884.1	B230209E15Rik-234	600	No protein	-	lncRNA	-
ENSMUST00000355867.1	B230209E15Rik-218	596	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,996 bps,

Version

ENSMUST00000355859.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000355859.1 B230209E15Rik-211

Summary

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Transcript: ENSMUST00000355859.1 B230209E15Rik-211

Summary

About Us

Get help

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