Transcript: ENSMUST00000354493.1

Description

novel transcript

Location

Chromosome 9: 100,055,055-100,078,923 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1689 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000139674.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000354492.1	-	456	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000354493.1	-	1093	No protein	-	lncRNA	-
ENSMUST00000354499.1	-	976	No protein	-	lncRNA	-
ENSMUST00000354496.1	-	894	No protein	-	lncRNA	-
ENSMUST00000354502.1	-	864	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000354495.1	-	715	No protein	-	lncRNA	-
ENSMUST00000354494.1	-	685	No protein	-	lncRNA	-
ENSMUST00000354498.1	-	675	No protein	-	lncRNA	-
ENSMUST00000354500.1	-	634	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000354497.1	-	633	No protein	-	lncRNA	-
ENSMUST00000354501.1	-	619	No protein	-	lncRNA	-
ENSMUST00000354503.1	-	572	No protein	-	lncRNA	-
ENSMUST00000354506.1	-	564	No protein	-	lncRNA	-
ENSMUST00000354504.1	-	535	No protein	-	lncRNA	-
ENSMUST00000354505.1	-	433	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,093 bps,

Version

ENSMUST00000354493.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000354493.1

Summary

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Transcript: ENSMUST00000354493.1

Summary

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