Transcript: ENSMUST00000348018.1 Gm47507-228

Description

predicted gene, 47507 [Source:MGI Symbol;Acc:MGI:6096493]

Location

Chromosome 13: 5,947,753-5,978,674 forward strand.

About this transcript

This transcript has 2 exons and is associated with 1640 variant alleles.

Gene

This transcript is a product of gene ENSMUSG00000113757.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000347819.1	Gm47507-204	844	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348018.1	Gm47507-228	1644	No protein	-	lncRNA	-
ENSMUST00000221291.2	Gm47507-201	1089	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000347825.1	Gm47507-210	1008	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348017.1	Gm47507-227	988	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347830.1	Gm47507-215	926	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348020.1	Gm47507-230	919	No protein	-	lncRNA	-
ENSMUST00000347822.1	Gm47507-207	916	No protein	-	lncRNA	-
ENSMUST00000347828.1	Gm47507-213	898	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347837.1	Gm47507-222	856	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000221487.3	Gm47507-202	806	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000223425.3	Gm47507-203	804	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000348019.1	Gm47507-229	800	No protein	-	lncRNA	-
ENSMUST00000347826.1	Gm47507-211	794	No protein	-	lncRNA	-
ENSMUST00000347833.1	Gm47507-218	785	No protein	-	lncRNA	-
ENSMUST00000347821.1	Gm47507-206	755	No protein	-	lncRNA	-
ENSMUST00000347832.1	Gm47507-217	754	No protein	-	lncRNA	-
ENSMUST00000347836.1	Gm47507-221	753	No protein	-	lncRNA	-
ENSMUST00000347827.1	Gm47507-212	715	No protein	-	lncRNA	-
ENSMUST00000347835.1	Gm47507-220	655	No protein	-	lncRNA	-
ENSMUST00000347824.1	Gm47507-209	649	No protein	-	lncRNA	-
ENSMUST00000347838.1	Gm47507-223	644	No protein	-	lncRNA	-
ENSMUST00000347829.1	Gm47507-214	635	No protein	-	lncRNA	-
ENSMUST00000347839.1	Gm47507-224	627	No protein	-	lncRNA	-
ENSMUST00000347834.1	Gm47507-219	597	No protein	-	lncRNA	-
ENSMUST00000347831.1	Gm47507-216	561	No protein	-	lncRNA	-
ENSMUST00000347841.1	Gm47507-226	546	No protein	-	lncRNA	-
ENSMUST00000347823.1	Gm47507-208	528	No protein	-	lncRNA	-
ENSMUST00000347820.1	Gm47507-205	526	No protein	-	lncRNA	-
ENSMUST00000347840.1	Gm47507-225	498	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,644 bps,

Version

ENSMUST00000348018.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000348018.1 Gm47507-228

Summary

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Transcript: ENSMUST00000348018.1 Gm47507-228

Summary

About Us

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