Transcript: ENSMUST00000345792.1 Gm44767-279

Description

predicted gene 44767 [Source:MGI Symbol;Acc:MGI:5753343]

Location

Chromosome 7: 38,078,775-38,130,500 forward strand.

About this transcript

This transcript has 5 exons, is associated with 7580 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000108749.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000345166.1	Gm44767-205	1736	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345792.1	Gm44767-279	1999	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345745.1	Gm44767-232	1925	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345746.1	Gm44767-233	1847	No protein	-	lncRNA	-
ENSMUST00000345747.1	Gm44767-234	1831	No protein	-	lncRNA	-
ENSMUST00000345751.1	Gm44767-238	1830	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345748.1	Gm44767-235	1762	No protein	-	lncRNA	-
ENSMUST00000345744.1	Gm44767-231	1751	No protein	-	lncRNA	-
ENSMUST00000345750.1	Gm44767-237	1745	No protein	-	lncRNA	-
ENSMUST00000345749.1	Gm44767-236	1742	No protein	-	lncRNA	-
ENSMUST00000185556.8	Gm44767-201	1703	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000345753.1	Gm44767-240	1637	No protein	-	lncRNA	-
ENSMUST00000345770.1	Gm44767-257	1637	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345167.1	Gm44767-206	1635	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345763.1	Gm44767-250	1607	No protein	-	lncRNA	-
ENSMUST00000185975.3	Gm44767-202	1606	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000345769.1	Gm44767-256	1606	No protein	-	lncRNA	-
ENSMUST00000345762.1	Gm44767-249	1589	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345754.1	Gm44767-241	1543	No protein	-	lncRNA	-
ENSMUST00000345760.1	Gm44767-247	1531	No protein	-	lncRNA	-
ENSMUST00000345465.1	Gm44767-211	1497	No protein	-	lncRNA	-
ENSMUST00000345764.1	Gm44767-251	1493	No protein	-	lncRNA	-
ENSMUST00000345772.1	Gm44767-259	1492	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345795.1	Gm44767-282	1492	No protein	-	lncRNA	-
ENSMUST00000345771.1	Gm44767-258	1482	No protein	-	lncRNA	-
ENSMUST00000345781.1	Gm44767-268	1475	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345755.1	Gm44767-242	1473	No protein	-	lncRNA	-
ENSMUST00000345768.1	Gm44767-255	1467	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345775.1	Gm44767-262	1432	No protein	-	lncRNA	-
ENSMUST00000345758.1	Gm44767-245	1383	No protein	-	lncRNA	-
ENSMUST00000345796.1	Gm44767-283	1381	No protein	-	lncRNA	-
ENSMUST00000345814.1	Gm44767-301	1367	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345757.1	Gm44767-244	1363	No protein	-	lncRNA	-
ENSMUST00000345468.1	Gm44767-214	1357	No protein	-	lncRNA	-
ENSMUST00000345784.1	Gm44767-271	1346	No protein	-	lncRNA	-
ENSMUST00000345774.1	Gm44767-261	1340	No protein	-	lncRNA	-
ENSMUST00000345807.1	Gm44767-294	1312	No protein	-	lncRNA	-
ENSMUST00000345765.1	Gm44767-252	1300	No protein	-	lncRNA	-
ENSMUST00000345776.1	Gm44767-263	1294	No protein	-	lncRNA	-
ENSMUST00000345767.1	Gm44767-254	1277	No protein	-	lncRNA	-
ENSMUST00000345804.1	Gm44767-291	1275	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345761.1	Gm44767-248	1255	No protein	-	lncRNA	-
ENSMUST00000345467.1	Gm44767-213	1252	No protein	-	lncRNA	-
ENSMUST00000345168.1	Gm44767-207	1252	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345773.1	Gm44767-260	1240	No protein	-	lncRNA	-
ENSMUST00000345802.1	Gm44767-289	1229	No protein	-	lncRNA	-
ENSMUST00000345766.1	Gm44767-253	1228	No protein	-	lncRNA	-
ENSMUST00000345809.1	Gm44767-296	1208	No protein	-	lncRNA	-
ENSMUST00000345805.1	Gm44767-292	1203	No protein	-	lncRNA	-
ENSMUST00000345759.1	Gm44767-246	1185	No protein	-	lncRNA	-
ENSMUST00000345782.1	Gm44767-269	1181	No protein	-	lncRNA	-
ENSMUST00000345481.1	Gm44767-227	1172	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345780.1	Gm44767-267	1171	No protein	-	lncRNA	-
ENSMUST00000345798.1	Gm44767-285	1167	No protein	-	lncRNA	-
ENSMUST00000345475.1	Gm44767-221	1165	No protein	-	lncRNA	-
ENSMUST00000345808.1	Gm44767-295	1139	No protein	-	lncRNA	-
ENSMUST00000345170.1	Gm44767-209	1135	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345799.1	Gm44767-286	1123	No protein	-	lncRNA	-
ENSMUST00000345812.1	Gm44767-299	1118	No protein	-	lncRNA	-
ENSMUST00000345752.1	Gm44767-239	1117	No protein	-	lncRNA	-
ENSMUST00000345801.1	Gm44767-288	1115	No protein	-	lncRNA	-
ENSMUST00000345813.1	Gm44767-300	1102	No protein	-	lncRNA	-
ENSMUST00000345797.1	Gm44767-284	1100	No protein	-	lncRNA	-
ENSMUST00000345756.1	Gm44767-243	1091	No protein	-	lncRNA	-
ENSMUST00000345794.1	Gm44767-281	1069	No protein	-	lncRNA	-
ENSMUST00000345466.1	Gm44767-212	1069	No protein	-	lncRNA	-
ENSMUST00000345810.1	Gm44767-297	1068	No protein	-	lncRNA	-
ENSMUST00000345474.1	Gm44767-220	1065	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345480.1	Gm44767-226	1065	No protein	-	lncRNA	-
ENSMUST00000345803.1	Gm44767-290	1052	No protein	-	lncRNA	-
ENSMUST00000345806.1	Gm44767-293	1030	No protein	-	lncRNA	-
ENSMUST00000345786.1	Gm44767-273	1023	No protein	-	lncRNA	-
ENSMUST00000345785.1	Gm44767-272	1022	No protein	-	lncRNA	-
ENSMUST00000345816.1	Gm44767-302	1004	No protein	-	lncRNA	-
ENSMUST00000345779.1	Gm44767-266	993	No protein	-	lncRNA	-
ENSMUST00000345800.1	Gm44767-287	975	No protein	-	lncRNA	-
ENSMUST00000345811.1	Gm44767-298	952	No protein	-	lncRNA	-
ENSMUST00000345476.1	Gm44767-222	924	No protein	-	lncRNA	-
ENSMUST00000345777.1	Gm44767-264	921	No protein	-	lncRNA	-
ENSMUST00000186462.3	Gm44767-203	916	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000345778.1	Gm44767-265	912	No protein	-	lncRNA	-
ENSMUST00000345478.1	Gm44767-224	901	No protein	-	lncRNA	-
ENSMUST00000345477.1	Gm44767-223	898	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345789.1	Gm44767-276	865	No protein	-	lncRNA	-
ENSMUST00000345788.1	Gm44767-275	849	No protein	-	lncRNA	-
ENSMUST00000345783.1	Gm44767-270	842	No protein	-	lncRNA	-
ENSMUST00000345790.1	Gm44767-277	835	No protein	-	lncRNA	-
ENSMUST00000345169.1	Gm44767-208	827	No protein	-	lncRNA	-
ENSMUST00000345793.1	Gm44767-280	805	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345482.1	Gm44767-228	733	No protein	-	lncRNA	-
ENSMUST00000345473.1	Gm44767-219	732	No protein	-	lncRNA	-
ENSMUST00000345791.1	Gm44767-278	701	No protein	-	lncRNA	-
ENSMUST00000345469.1	Gm44767-215	681	No protein	-	lncRNA	-
ENSMUST00000345471.1	Gm44767-217	653	No protein	-	lncRNA	-
ENSMUST00000345472.1	Gm44767-218	630	No protein	-	lncRNA	-
ENSMUST00000345479.1	Gm44767-225	609	No protein	-	lncRNA	-
ENSMUST00000345817.1	Gm44767-303	592	No protein	-	lncRNA	-
ENSMUST00000345787.1	Gm44767-274	580	No protein	-	lncRNA	-
ENSMUST00000345470.1	Gm44767-216	555	No protein	-	lncRNA	-
ENSMUST00000345172.1	Gm44767-210	540	No protein	-	lncRNA	-
ENSMUST00000206634.2	Gm44767-204	469	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000345483.1	Gm44767-229	464	No protein	-	lncRNA	-
ENSMUST00000345484.1	Gm44767-230	320	No protein	-	lncRNA	-
ENSMUST00000345818.1	Gm44767-304	288	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,999 bps,

Version

ENSMUST00000345792.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000345792.1 Gm44767-279

Summary

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Transcript: ENSMUST00000345792.1 Gm44767-279

Summary

About Us

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