Transcript: ENSMUST00000343133.1 Gm29856-204

Description

predicted gene, 29856 [Source:MGI Symbol;Acc:MGI:5589015]

Location

Chromosome 1: 177,286,183-177,288,781 forward strand.

About this transcript

This transcript has 2 exons, is associated with 602 variant alleles and maps to 21 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000102432.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000343132.1	Gm29856-203	1550	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000343133.1	Gm29856-204	1776	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000191905.3	Gm29856-201	1587	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000192282.3	Gm29856-202	1564	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000343135.1	Gm29856-206	1192	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343134.1	Gm29856-205	1108	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343140.1	Gm29856-211	1077	No protein	-	lncRNA	-
ENSMUST00000343136.1	Gm29856-207	1037	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000343139.1	Gm29856-210	942	No protein	-	lncRNA	-
ENSMUST00000343137.1	Gm29856-208	885	No protein	-	lncRNA	-
ENSMUST00000343138.1	Gm29856-209	846	No protein	-	lncRNA	-
ENSMUST00000343141.1	Gm29856-212	798	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,776 bps,

Version

ENSMUST00000343133.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000343133.1 Gm29856-204

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Transcript: ENSMUST00000343133.1 Gm29856-204

Summary

About Us

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