Transcript: ENSMUST00000340852.1 Gm12746-205

Description

predicted gene 12746 [Source:MGI Symbol;Acc:MGI:3652135]

Location

Chromosome 4: 106,698,338-106,712,392 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1414 variant alleles and maps to 27 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086940.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000340849.1	Gm12746-202	634	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000340852.1	Gm12746-205	1428	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340857.1	Gm12746-210	1362	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340858.1	Gm12746-211	1214	No protein	-	lncRNA	-
ENSMUST00000340851.1	Gm12746-204	1211	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340865.1	Gm12746-218	1204	No protein	-	lncRNA	-
ENSMUST00000340850.1	Gm12746-203	1169	No protein	-	lncRNA	-
ENSMUST00000340853.1	Gm12746-206	761	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340856.1	Gm12746-209	698	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340860.1	Gm12746-213	666	No protein	-	lncRNA	-
ENSMUST00000151369.2	Gm12746-201	615	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000340862.1	Gm12746-215	520	No protein	-	lncRNA	-
ENSMUST00000340859.1	Gm12746-212	514	No protein	-	lncRNA	-
ENSMUST00000340864.1	Gm12746-217	508	No protein	-	lncRNA	-
ENSMUST00000340855.1	Gm12746-208	507	No protein	-	lncRNA	-
ENSMUST00000340854.1	Gm12746-207	485	No protein	-	lncRNA	-
ENSMUST00000340861.1	Gm12746-214	393	No protein	-	lncRNA	-
ENSMUST00000340863.1	Gm12746-216	382	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,428 bps,

Version

ENSMUST00000340852.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000340852.1 Gm12746-205

Summary

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Transcript: ENSMUST00000340852.1 Gm12746-205

Summary

About Us

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