Transcript: ENSMUST00000338913.1

Description

novel transcript

Location

Chromosome 2: 100,192,013-100,238,139 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 3292 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000137007.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000338907.1	-	505	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000338913.1	-	734	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338908.1	-	662	No protein	-	lncRNA	-
ENSMUST00000338914.1	-	621	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338920.1	-	619	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338916.1	-	616	No protein	-	lncRNA	-
ENSMUST00000338921.1	-	615	No protein	-	lncRNA	-
ENSMUST00000338910.1	-	585	No protein	-	lncRNA	-
ENSMUST00000338912.1	-	565	No protein	-	lncRNA	-
ENSMUST00000338922.1	-	565	No protein	-	lncRNA	-
ENSMUST00000338909.1	-	554	No protein	-	lncRNA	-
ENSMUST00000338915.1	-	543	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338919.1	-	536	No protein	-	lncRNA	-
ENSMUST00000338918.1	-	533	No protein	-	lncRNA	-
ENSMUST00000338925.1	-	518	No protein	-	lncRNA	-
ENSMUST00000338923.1	-	509	No protein	-	lncRNA	-
ENSMUST00000338924.1	-	492	No protein	-	lncRNA	-
ENSMUST00000338926.1	-	477	No protein	-	lncRNA	-
ENSMUST00000338911.1	-	453	No protein	-	lncRNA	-
ENSMUST00000338927.1	-	445	No protein	-	lncRNA	-
ENSMUST00000338917.1	-	382	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 734 bps,

Version

ENSMUST00000338913.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000338913.1

Summary

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Transcript: ENSMUST00000338913.1

Summary

About Us

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