Transcript: ENSMUST00000338510.1 4930571N24Rik-206

Description

RIKEN cDNA 4930571N24 gene [Source:MGI Symbol;Acc:MGI:1925474]

Location

Chromosome 15: 77,313,073-77,347,678 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2023 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086467.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000132871.3	4930571N24Rik-201	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000338508.1	4930571N24Rik-204	818	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000338510.1	4930571N24Rik-206	857	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338509.1	4930571N24Rik-205	848	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000229381.2	4930571N24Rik-203	669	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000142914.3	4930571N24Rik-202	612	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000338518.1	4930571N24Rik-214	611	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338512.1	4930571N24Rik-208	609	No protein	-	lncRNA	-
ENSMUST00000338519.1	4930571N24Rik-215	499	No protein	-	lncRNA	-
ENSMUST00000338513.1	4930571N24Rik-209	487	No protein	-	lncRNA	-
ENSMUST00000338517.1	4930571N24Rik-213	470	No protein	-	lncRNA	-
ENSMUST00000338511.1	4930571N24Rik-207	463	No protein	-	lncRNA	-
ENSMUST00000338515.1	4930571N24Rik-211	395	No protein	-	lncRNA	-
ENSMUST00000338514.1	4930571N24Rik-210	383	No protein	-	lncRNA	-
ENSMUST00000338516.1	4930571N24Rik-212	371	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 857 bps,

Version

ENSMUST00000338510.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000338510.1 4930571N24Rik-206

Summary

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Transcript: ENSMUST00000338510.1 4930571N24Rik-206

Summary

About Us

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