Transcript: ENSMUST00000338504.1 Gm49708-203

Description

predicted gene, 49708 [Source:MGI Symbol;Acc:MGI:6215173]

Location

Chromosome 16: 90,137,122-90,146,590 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 776 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000116656.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000231405.2	Gm49708-201	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSMUST00000338504.1	Gm49708-203	4156	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338505.1	Gm49708-204	2762	No protein	-	lncRNA	-
ENSMUST00000338506.1	Gm49708-205	2731	No protein	-	lncRNA	-
ENSMUST00000338507.1	Gm49708-206	1367	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000231663.2	Gm49708-202	1236	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 4,156 bps,

Version

ENSMUST00000338504.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000338504.1 Gm49708-203

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Transcript: ENSMUST00000338504.1 Gm49708-203

Summary

About Us

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