Transcript: ENSMUST00000337834.1

Description

novel transcript, antisense to Slamf9 and Igsf9

Location

Chromosome 1: 172,307,068-172,309,737 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 622 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000136834.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000337826.1	-	776	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000337834.1	-	1747	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000337829.1	-	1618	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000337835.1	-	1588	No protein	-	lncRNA	-
ENSMUST00000337828.1	-	1127	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000337838.1	-	1007	No protein	-	lncRNA	-
ENSMUST00000337830.1	-	856	No protein	-	lncRNA	-
ENSMUST00000337827.1	-	683	No protein	-	lncRNA	-
ENSMUST00000337833.1	-	677	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000337837.1	-	658	No protein	-	lncRNA	-
ENSMUST00000337832.1	-	551	No protein	-	lncRNA	-
ENSMUST00000337836.1	-	532	No protein	-	lncRNA	-
ENSMUST00000337831.1	-	512	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,747 bps,

Version

ENSMUST00000337834.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000337834.1

Summary

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Transcript: ENSMUST00000337834.1

Summary

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