Transcript: ENSMUST00000334513.1 Gm42984-215

Description

predicted gene 42984 [Source:MGI Symbol;Acc:MGI:5663121]

Location

Chromosome 5: 44,396,759-44,399,507 forward strand.

About this transcript

This transcript has 3 exons, is associated with 732 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000104784.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000334516.1	Gm42984-218	396	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000334513.1	Gm42984-215	1218	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000195990.3	Gm42984-201	991	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000334503.1	Gm42984-206	919	No protein	-	lncRNA	-
ENSMUST00000334499.1	Gm42984-202	805	No protein	-	lncRNA	-
ENSMUST00000334502.1	Gm42984-205	764	No protein	-	lncRNA	-
ENSMUST00000334508.1	Gm42984-210	694	No protein	-	lncRNA	-
ENSMUST00000334510.1	Gm42984-212	675	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334506.1	Gm42984-208	649	No protein	-	lncRNA	-
ENSMUST00000334500.1	Gm42984-203	639	No protein	-	lncRNA	-
ENSMUST00000334512.1	Gm42984-214	628	No protein	-	lncRNA	-
ENSMUST00000334501.1	Gm42984-204	605	No protein	-	lncRNA	-
ENSMUST00000334509.1	Gm42984-211	605	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334504.1	Gm42984-207	594	No protein	-	lncRNA	-
ENSMUST00000334514.1	Gm42984-216	500	No protein	-	lncRNA	-
ENSMUST00000334507.1	Gm42984-209	462	No protein	-	lncRNA	-
ENSMUST00000334511.1	Gm42984-213	458	No protein	-	lncRNA	-
ENSMUST00000334515.1	Gm42984-217	381	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,218 bps,

Version

ENSMUST00000334513.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000334513.1 Gm42984-215

Summary

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Transcript: ENSMUST00000334513.1 Gm42984-215

Summary

About Us

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