Transcript: ENSMUST00000334271.1

Description

novel transcript, antisense to Nrxn3

Location

Chromosome 12: 88,902,016-88,939,412 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 2069 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000136127.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000334269.1	-	550	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334271.1	-	726	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334272.1	-	667	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334274.1	-	546	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334275.1	-	503	No protein	-	lncRNA	-
ENSMUST00000334278.1	-	468	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334273.1	-	452	No protein	-	lncRNA	-
ENSMUST00000334270.1	-	425	No protein	-	lncRNA	-
ENSMUST00000334276.1	-	424	No protein	-	lncRNA	-
ENSMUST00000334279.1	-	284	No protein	-	lncRNA	-
ENSMUST00000334277.1	-	256	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 726 bps,

Version

ENSMUST00000334271.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000334271.1

Summary

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Transcript: ENSMUST00000334271.1

Summary

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