Transcript: ENSMUST00000331900.1 4930432H08Rik-206

Description

RIKEN cDNA 4930432H08 gene [Source:MGI Symbol;Acc:MGI:1921031]

Location

Chromosome 5: 106,443,205-106,470,584 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 1924 variant alleles and maps to 1 oligo probe.

Gene

This transcript is a product of gene ENSMUSG00000106594.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000331896.1	4930432H08Rik-202	1543	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331900.1	4930432H08Rik-206	1824	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331904.1	4930432H08Rik-210	1679	No protein	-	lncRNA	-
ENSMUST00000331905.1	4930432H08Rik-211	1655	No protein	-	lncRNA	-
ENSMUST00000331903.1	4930432H08Rik-209	1613	No protein	-	lncRNA	-
ENSMUST00000331912.1	4930432H08Rik-218	1349	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000198220.2	4930432H08Rik-201	1284	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000331911.1	4930432H08Rik-217	1126	No protein	-	lncRNA	-
ENSMUST00000331909.1	4930432H08Rik-215	1076	No protein	-	lncRNA	-
ENSMUST00000331902.1	4930432H08Rik-208	1071	No protein	-	lncRNA	-
ENSMUST00000331901.1	4930432H08Rik-207	1008	No protein	-	lncRNA	-
ENSMUST00000331907.1	4930432H08Rik-213	1005	No protein	-	lncRNA	-
ENSMUST00000331897.1	4930432H08Rik-203	991	No protein	-	lncRNA	-
ENSMUST00000331918.1	4930432H08Rik-224	977	No protein	-	lncRNA	-
ENSMUST00000331906.1	4930432H08Rik-212	922	No protein	-	lncRNA	-
ENSMUST00000331908.1	4930432H08Rik-214	896	No protein	-	lncRNA	-
ENSMUST00000331910.1	4930432H08Rik-216	872	No protein	-	lncRNA	-
ENSMUST00000331917.1	4930432H08Rik-223	852	No protein	-	lncRNA	-
ENSMUST00000331919.1	4930432H08Rik-225	808	No protein	-	lncRNA	-
ENSMUST00000331916.1	4930432H08Rik-222	787	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331899.1	4930432H08Rik-205	597	No protein	-	lncRNA	-
ENSMUST00000331913.1	4930432H08Rik-219	445	No protein	-	lncRNA	-
ENSMUST00000331898.1	4930432H08Rik-204	370	No protein	-	lncRNA	-
ENSMUST00000331914.1	4930432H08Rik-220	353	No protein	-	lncRNA	-
ENSMUST00000331915.1	4930432H08Rik-221	253	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,824 bps,

Version

ENSMUST00000331900.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000331900.1 4930432H08Rik-206

Summary

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Transcript: ENSMUST00000331900.1 4930432H08Rik-206

Summary

About Us

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