Transcript: ENSMUST00000327530.1 Gm36423-217

Description

predicted gene, 36423 [Source:MGI Symbol;Acc:MGI:5595582]

Location

Chromosome 13: 9,733,858-9,735,698 forward strand.

About this transcript

This transcript has 1 exon, is associated with 620 variant alleles and maps to 37 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000114138.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000327518.1	Gm36423-205	674	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327530.1	Gm36423-217	1841	No protein	-	lncRNA	-
ENSMUST00000222215.3	Gm36423-202	1308	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000221492.3	Gm36423-201	1043	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000222446.3	Gm36423-204	1008	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000327528.1	Gm36423-215	780	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327534.1	Gm36423-221	731	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327533.1	Gm36423-220	692	No protein	-	lncRNA	-
ENSMUST00000327526.1	Gm36423-213	683	No protein	-	lncRNA	-
ENSMUST00000327527.1	Gm36423-214	669	No protein	-	lncRNA	-
ENSMUST00000327520.1	Gm36423-207	647	No protein	-	lncRNA	-
ENSMUST00000327525.1	Gm36423-212	639	No protein	-	lncRNA	-
ENSMUST00000327519.1	Gm36423-206	635	No protein	-	lncRNA	-
ENSMUST00000327521.1	Gm36423-208	590	No protein	-	lncRNA	-
ENSMUST00000327529.1	Gm36423-216	574	No protein	-	lncRNA	-
ENSMUST00000327531.1	Gm36423-218	568	No protein	-	lncRNA	-
ENSMUST00000327535.1	Gm36423-222	561	No protein	-	lncRNA	-
ENSMUST00000327522.1	Gm36423-209	552	No protein	-	lncRNA	-
ENSMUST00000327523.1	Gm36423-210	546	No protein	-	lncRNA	-
ENSMUST00000327524.1	Gm36423-211	526	No protein	-	lncRNA	-
ENSMUST00000222421.2	Gm36423-203	481	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000327532.1	Gm36423-219	470	No protein	-	lncRNA	-
ENSMUST00000327538.1	Gm36423-225	402	No protein	-	lncRNA	-
ENSMUST00000327537.1	Gm36423-224	386	No protein	-	lncRNA	-
ENSMUST00000327536.1	Gm36423-223	316	No protein	-	lncRNA	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,841 bps,

Version

ENSMUST00000327530.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000327530.1 Gm36423-217

Summary

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Transcript: ENSMUST00000327530.1 Gm36423-217

Summary

About Us

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