Transcript: ENSMUST00000327023.1 Gm48215-215

Description

predicted gene, 48215 [Source:MGI Symbol;Acc:MGI:6097611]

Location

Chromosome 10: 29,859,442-29,864,569 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 711 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000111195.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000213166.3	Gm48215-201	451	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000327023.1	Gm48215-215	1012	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327019.1	Gm48215-212	975	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327018.1	Gm48215-211	765	No protein	-	lncRNA	-
ENSMUST00000327017.1	Gm48215-210	734	No protein	-	lncRNA	-
ENSMUST00000216752.3	Gm48215-202	660	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000327015.1	Gm48215-208	597	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327022.1	Gm48215-214	569	No protein	-	lncRNA	-
ENSMUST00000327010.1	Gm48215-203	529	No protein	-	lncRNA	-
ENSMUST00000327012.1	Gm48215-205	511	No protein	-	lncRNA	-
ENSMUST00000327021.1	Gm48215-213	489	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327014.1	Gm48215-207	469	No protein	-	lncRNA	-
ENSMUST00000327016.1	Gm48215-209	459	No protein	-	lncRNA	-
ENSMUST00000327011.1	Gm48215-204	433	No protein	-	lncRNA	-
ENSMUST00000327013.1	Gm48215-206	372	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,012 bps,

Version

ENSMUST00000327023.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000327023.1 Gm48215-215

Summary

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Transcript: ENSMUST00000327023.1 Gm48215-215

Summary

About Us

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