Transcript: ENSMUST00000323819.1 Gm53541-204

Description

predicted gene, 53541 [Source:MGI Symbol;Acc:MGI:6722134]

Location

Chromosome 1: 23,295,356-23,311,075 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1062 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000134304.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000323817.1	Gm53541-202	824	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000323819.1	Gm53541-204	2603	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323818.1	Gm53541-203	2495	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323821.1	Gm53541-206	1886	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323826.1	Gm53541-211	1841	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323820.1	Gm53541-205	1755	No protein	-	lncRNA	-
ENSMUST00000323829.1	Gm53541-214	1623	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323824.1	Gm53541-209	1614	No protein	-	lncRNA	-
ENSMUST00000323828.1	Gm53541-213	1471	No protein	-	lncRNA	-
ENSMUST00000323827.1	Gm53541-212	1361	No protein	-	lncRNA	-
ENSMUST00000323825.1	Gm53541-210	1216	No protein	-	lncRNA	-
ENSMUST00000323833.1	Gm53541-218	1158	No protein	-	lncRNA	-
ENSMUST00000323822.1	Gm53541-207	1121	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323832.1	Gm53541-217	992	No protein	-	lncRNA	-
ENSMUST00000323816.1	Gm53541-201	778	No protein	-	lncRNA	-
ENSMUST00000323834.1	Gm53541-219	594	No protein	-	lncRNA	-
ENSMUST00000323830.1	Gm53541-215	484	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323831.1	Gm53541-216	435	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000323835.1	Gm53541-220	373	No protein	-	lncRNA	-
ENSMUST00000323823.1	Gm53541-208	325	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,603 bps,

Version

ENSMUST00000323819.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000323819.1 Gm53541-204

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Transcript: ENSMUST00000323819.1 Gm53541-204

Summary

About Us

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