Transcript: ENSMUST00000322800.1

Description

novel transcript, antisense to Ckap5

Location

Chromosome 2: 91,400,257-91,416,355 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1126 variant alleles and maps to 3 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000134176.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000322793.1	-	391	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000322800.1	-	1042	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322799.1	-	522	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322798.1	-	511	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322806.1	-	486	No protein	-	lncRNA	-
ENSMUST00000322796.1	-	470	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322808.1	-	445	No protein	-	lncRNA	-
ENSMUST00000322795.1	-	425	No protein	-	lncRNA	-
ENSMUST00000322807.1	-	388	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322801.1	-	385	No protein	-	lncRNA	-
ENSMUST00000322802.1	-	381	No protein	-	lncRNA	-
ENSMUST00000322805.1	-	362	No protein	-	lncRNA	-
ENSMUST00000322794.1	-	358	No protein	-	lncRNA	-
ENSMUST00000322803.1	-	354	No protein	-	lncRNA	-
ENSMUST00000322804.1	-	343	No protein	-	lncRNA	-
ENSMUST00000322797.1	-	334	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,042 bps,

Version

ENSMUST00000322800.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000322800.1

Summary

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Transcript: ENSMUST00000322800.1

Summary

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