Transcript: ENSMUST00000318374.1 Gm56616-214

Description

predicted gene, 56616 [Source:MGI Symbol;Acc:MGI:7337146]

Location

Chromosome 13: 66,098,384-66,105,151 forward strand.

About this transcript

This transcript has 3 exons, is associated with 760 variant alleles and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000120021.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000318366.1	Gm56616-206	467	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000318374.1	Gm56616-214	1235	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244504.2	Gm56616-204	1200	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245498.2	Gm56616-205	1199	No protein	-	lncRNA	-
ENSMUST00000244251.2	Gm56616-203	1038	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241061.1	Gm56616-202	953	No protein	-	lncRNA	-
ENSMUST00000318375.1	Gm56616-215	909	No protein	-	lncRNA	-
ENSMUST00000318888.1	Gm56616-221	846	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318368.1	Gm56616-208	806	No protein	-	lncRNA	-
ENSMUST00000318367.1	Gm56616-207	776	No protein	-	lncRNA	-
ENSMUST00000318889.1	Gm56616-222	657	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318370.1	Gm56616-210	656	No protein	-	lncRNA	-
ENSMUST00000318369.1	Gm56616-209	586	No protein	-	lncRNA	-
ENSMUST00000318890.1	Gm56616-223	576	No protein	-	lncRNA	-
ENSMUST00000221828.2	Gm56616-201	569	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000318373.1	Gm56616-213	568	No protein	-	lncRNA	-
ENSMUST00000318886.1	Gm56616-219	557	No protein	-	lncRNA	-
ENSMUST00000318887.1	Gm56616-220	542	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318372.1	Gm56616-212	503	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318884.1	Gm56616-217	474	No protein	-	lncRNA	-
ENSMUST00000318371.1	Gm56616-211	461	No protein	-	lncRNA	-
ENSMUST00000318885.1	Gm56616-218	427	No protein	-	lncRNA	-
ENSMUST00000318376.1	Gm56616-216	289	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,235 bps,

Version

ENSMUST00000318374.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000318374.1 Gm56616-214

Summary

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Transcript: ENSMUST00000318374.1 Gm56616-214

Summary

About Us

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