Transcript: ENSMUST00000311843.1 Gm56542-211

Description

predicted gene, 56542 [Source:MGI Symbol;Acc:MGI:7336998]

Location

Chromosome 12: 104,044,204-104,053,179 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1067 variant alleles and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000120841.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000311834.1	Gm56542-202	900	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000311843.1	Gm56542-211	3733	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311842.1	Gm56542-210	2466	No protein	-	lncRNA	-
ENSMUST00000311845.1	Gm56542-213	2172	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311836.1	Gm56542-204	2135	No protein	-	lncRNA	-
ENSMUST00000311840.1	Gm56542-208	1887	No protein	-	lncRNA	-
ENSMUST00000311844.1	Gm56542-212	1857	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311838.1	Gm56542-206	1573	No protein	-	lncRNA	-
ENSMUST00000311839.1	Gm56542-207	1529	No protein	-	lncRNA	-
ENSMUST00000311835.1	Gm56542-203	1485	No protein	-	lncRNA	-
ENSMUST00000311846.1	Gm56542-214	1464	No protein	-	lncRNA	-
ENSMUST00000311841.1	Gm56542-209	1281	No protein	-	lncRNA	-
ENSMUST00000246067.1	Gm56542-201	1225	No protein	-	lncRNA	-
ENSMUST00000311837.1	Gm56542-205	1109	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 3,733 bps,

Version

ENSMUST00000311843.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000311843.1 Gm56542-211

Summary

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Transcript: ENSMUST00000311843.1 Gm56542-211

Summary

About Us

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