Transcript: ENSMUST00000299793.1

Description

novel transcript, antisense to Spa17

Location

Chromosome 9: 37,484,037-37,486,856 forward strand.

About this transcript

This transcript has 2 exons, is associated with 501 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000130430.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000299782.1	-	436	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000299793.1	-	2419	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299787.1	-	1641	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299791.1	-	783	No protein	-	lncRNA	-
ENSMUST00000299789.1	-	757	No protein	-	lncRNA	-
ENSMUST00000299788.1	-	748	No protein	-	lncRNA	-
ENSMUST00000299784.1	-	655	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299792.1	-	497	No protein	-	lncRNA	-
ENSMUST00000299785.1	-	477	No protein	-	lncRNA	-
ENSMUST00000299783.1	-	430	No protein	-	lncRNA	-
ENSMUST00000299794.1	-	414	No protein	-	lncRNA	-
ENSMUST00000299795.1	-	229	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,419 bps,

Version

ENSMUST00000299793.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000299793.1

Summary

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Transcript: ENSMUST00000299793.1

Summary

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