Transcript: ENSMUST00000299761.1 Gm44145-213

Description

predicted gene, 44145 [Source:MGI Symbol;Acc:MGI:5690537]

Location

Chromosome 6: 82,656,896-82,661,774 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2214 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000107453.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000299751.1	Gm44145-203	523	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000299761.1	Gm44145-213	972	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299755.1	Gm44145-207	743	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299760.1	Gm44145-212	704	No protein	-	lncRNA	-
ENSMUST00000299756.1	Gm44145-208	652	No protein	-	lncRNA	-
ENSMUST00000299752.1	Gm44145-204	600	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299753.1	Gm44145-205	592	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299757.1	Gm44145-209	527	No protein	-	lncRNA	-
ENSMUST00000299764.1	Gm44145-216	519	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000299759.1	Gm44145-211	502	No protein	-	lncRNA	-
ENSMUST00000203711.3	Gm44145-201	485	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000299765.1	Gm44145-217	451	No protein	-	lncRNA	-
ENSMUST00000299750.1	Gm44145-202	442	No protein	-	lncRNA	-
ENSMUST00000299762.1	Gm44145-214	388	No protein	-	lncRNA	-
ENSMUST00000299754.1	Gm44145-206	302	No protein	-	lncRNA	-
ENSMUST00000299758.1	Gm44145-210	238	No protein	-	lncRNA	-
ENSMUST00000299763.1	Gm44145-215	193	No protein	-	lncRNA	-
ENSMUST00000299766.1	Gm44145-218	145	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 972 bps,

Version

ENSMUST00000299761.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000299761.1 Gm44145-213

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Transcript: ENSMUST00000299761.1 Gm44145-213

Summary

About Us

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