Transcript: ENSMUST00000296047.1 1700119I11Rik-206

Description

RIKEN cDNA 1700119I11 gene [Source:MGI Symbol;Acc:MGI:1925729]

Location

Chromosome 13: 92,009,551-92,010,175 forward strand.

About this transcript

This transcript has 2 exons, is associated with 551 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000082488.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000296044.1	1700119I11Rik-203	394	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000296047.1	1700119I11Rik-206	534	No protein	-	lncRNA	-
ENSMUST00000296049.1	1700119I11Rik-208	416	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000296045.1	1700119I11Rik-204	415	No protein	-	lncRNA	-
ENSMUST00000296051.1	1700119I11Rik-210	404	No protein	-	lncRNA	-
ENSMUST00000296055.1	1700119I11Rik-214	404	No protein	-	lncRNA	-
ENSMUST00000296048.1	1700119I11Rik-207	387	No protein	-	lncRNA	-
ENSMUST00000296046.1	1700119I11Rik-205	377	No protein	-	lncRNA	-
ENSMUST00000189130.3	1700119I11Rik-202	338	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000122270.3	1700119I11Rik-201	336	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000296054.1	1700119I11Rik-213	332	No protein	-	lncRNA	-
ENSMUST00000296053.1	1700119I11Rik-212	329	No protein	-	lncRNA	-
ENSMUST00000296050.1	1700119I11Rik-209	319	No protein	-	lncRNA	-
ENSMUST00000296052.1	1700119I11Rik-211	310	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 534 bps,

Version

ENSMUST00000296047.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000296047.1 1700119I11Rik-206

Summary

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Transcript: ENSMUST00000296047.1 1700119I11Rik-206

Summary

About Us

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