Transcript: ENSMUST00000293669.1

Description

novel transcript

Location

Chromosome 5: 113,741,289-113,748,311 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1020 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000129427.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000293659.1	-	801	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000293669.1	-	1128	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293668.1	-	1091	No protein	-	lncRNA	-
ENSMUST00000293667.1	-	1046	No protein	-	lncRNA	-
ENSMUST00000293671.1	-	960	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293678.1	-	954	No protein	-	lncRNA	-
ENSMUST00000293660.1	-	930	No protein	-	lncRNA	-
ENSMUST00000293675.1	-	897	No protein	-	lncRNA	-
ENSMUST00000293666.1	-	889	No protein	-	lncRNA	-
ENSMUST00000293677.1	-	868	No protein	-	lncRNA	-
ENSMUST00000293673.1	-	860	No protein	-	lncRNA	-
ENSMUST00000293663.1	-	854	No protein	-	lncRNA	-
ENSMUST00000293672.1	-	849	No protein	-	lncRNA	-
ENSMUST00000293665.1	-	844	No protein	-	lncRNA	-
ENSMUST00000293661.1	-	718	No protein	-	lncRNA	-
ENSMUST00000293679.1	-	700	No protein	-	lncRNA	-
ENSMUST00000293670.1	-	661	No protein	-	lncRNA	-
ENSMUST00000293674.1	-	648	No protein	-	lncRNA	-
ENSMUST00000293664.1	-	596	No protein	-	lncRNA	-
ENSMUST00000293676.1	-	468	No protein	-	lncRNA	-
ENSMUST00000293662.1	-	442	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,128 bps,

Version

ENSMUST00000293669.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000293669.1

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Transcript: ENSMUST00000293669.1

Summary

About Us

Get help

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