Transcript: ENSMUST00000292808.1 Gm47966-209

Description

predicted gene, 47966 [Source:MGI Symbol;Acc:MGI:6097245]

Location

Chromosome 10: 126,525,853-126,528,454 reverse strand.

About this transcript

This transcript has 2 exons and is associated with 723 variant alleles.

Gene

This transcript is a product of gene ENSMUSG00000111961.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000292820.1	Gm47966-221	463	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292808.1	Gm47966-209	1533	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292801.1	Gm47966-202	939	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292814.1	Gm47966-215	713	No protein	-	lncRNA	-
ENSMUST00000292817.1	Gm47966-218	693	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000217923.2	Gm47966-201	675	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000292809.1	Gm47966-210	650	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292818.1	Gm47966-219	650	No protein	-	lncRNA	-
ENSMUST00000292812.1	Gm47966-213	616	No protein	-	lncRNA	-
ENSMUST00000292813.1	Gm47966-214	605	No protein	-	lncRNA	-
ENSMUST00000292804.1	Gm47966-205	600	No protein	-	lncRNA	-
ENSMUST00000292807.1	Gm47966-208	595	No protein	-	lncRNA	-
ENSMUST00000292802.1	Gm47966-203	455	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292803.1	Gm47966-204	449	No protein	-	lncRNA	-
ENSMUST00000292819.1	Gm47966-220	369	No protein	-	lncRNA	-
ENSMUST00000292810.1	Gm47966-211	313	No protein	-	lncRNA	-
ENSMUST00000292816.1	Gm47966-217	312	No protein	-	lncRNA	-
ENSMUST00000292811.1	Gm47966-212	303	No protein	-	lncRNA	-
ENSMUST00000292806.1	Gm47966-207	301	No protein	-	lncRNA	-
ENSMUST00000292805.1	Gm47966-206	265	No protein	-	lncRNA	-
ENSMUST00000292815.1	Gm47966-216	241	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,533 bps,

Version

ENSMUST00000292808.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000292808.1 Gm47966-209

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000292808.1 Gm47966-209

Summary

About Us

Get help

Our sister sites

Follow us