Transcript: ENSMUST00000285908.1 Gm48749-206

Description

predicted gene, 48749 [Source:MGI Symbol;Acc:MGI:6098424]

Location

Chromosome 10: 9,212,441-9,232,500 forward strand.

About this transcript

This transcript has 6 exons, is associated with 1468 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000111627.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000285904.1	Gm48749-202	726	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000285908.1	Gm48749-206	1250	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000285909.1	Gm48749-207	1009	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000285916.1	Gm48749-214	987	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000285907.1	Gm48749-205	969	No protein	-	lncRNA	-
ENSMUST00000285906.1	Gm48749-204	842	No protein	-	lncRNA	-
ENSMUST00000285915.1	Gm48749-213	787	No protein	-	lncRNA	-
ENSMUST00000285914.1	Gm48749-212	684	No protein	-	lncRNA	-
ENSMUST00000285913.1	Gm48749-211	624	No protein	-	lncRNA	-
ENSMUST00000285905.1	Gm48749-203	621	No protein	-	lncRNA	-
ENSMUST00000214867.3	Gm48749-201	611	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000285912.1	Gm48749-210	582	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000285918.1	Gm48749-216	547	No protein	-	lncRNA	-
ENSMUST00000285910.1	Gm48749-208	496	No protein	-	lncRNA	-
ENSMUST00000285911.1	Gm48749-209	339	No protein	-	lncRNA	-
ENSMUST00000285917.1	Gm48749-215	232	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,250 bps,

Version

ENSMUST00000285908.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000285908.1 Gm48749-206

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Transcript: ENSMUST00000285908.1 Gm48749-206

Summary

About Us

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