Transcript: ENSMUST00000284929.1 1700108N06Rik-212

Description

RIKEN cDNA 1700108N06 gene [Source:MGI Symbol;Acc:MGI:1920810]

Gene Synonyms

Gm38694, Gm43642

Location

Chromosome 5: 11,398,648-11,465,172 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 1052 variant alleles and maps to 61 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000106034.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000284919.1	1700108N06Rik-202	673	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000284929.1	1700108N06Rik-212	1865	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284927.1	1700108N06Rik-210	1072	No protein	-	lncRNA	-
ENSMUST00000284928.1	1700108N06Rik-211	1001	No protein	-	lncRNA	-
ENSMUST00000284923.1	1700108N06Rik-206	934	No protein	-	lncRNA	-
ENSMUST00000284920.1	1700108N06Rik-203	896	No protein	-	lncRNA	-
ENSMUST00000284926.1	1700108N06Rik-209	854	No protein	-	lncRNA	-
ENSMUST00000284921.1	1700108N06Rik-204	805	No protein	-	lncRNA	-
ENSMUST00000284930.1	1700108N06Rik-213	799	No protein	-	lncRNA	-
ENSMUST00000196572.2	1700108N06Rik-201	681	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000284924.1	1700108N06Rik-207	588	No protein	-	lncRNA	-
ENSMUST00000284925.1	1700108N06Rik-208	495	No protein	-	lncRNA	-
ENSMUST00000284922.1	1700108N06Rik-205	452	No protein	-	lncRNA	-
ENSMUST00000284931.1	1700108N06Rik-214	410	No protein	-	lncRNA	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,865 bps,

Version

ENSMUST00000284929.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000284929.1 1700108N06Rik-212

Summary

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Transcript: ENSMUST00000284929.1 1700108N06Rik-212

Summary

About Us

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