Transcript: ENSMUST00000275625.1 A330043C09Rik-202

Description

RIKEN cDNA A330043C09 gene [Source:MGI Symbol;Acc:MGI:2685671]

Gene Synonyms

LOC329430

Location

Chromosome 2: 74,977,183-75,008,048 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2242 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086044.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000275625.1	A330043C09Rik-202	1680	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000275628.1	A330043C09Rik-205	1547	No protein	-	lncRNA	-
ENSMUST00000275633.1	A330043C09Rik-210	1378	No protein	-	lncRNA	-
ENSMUST00000275626.1	A330043C09Rik-203	1373	No protein	-	lncRNA	-
ENSMUST00000275632.1	A330043C09Rik-209	1327	No protein	-	lncRNA	-
ENSMUST00000275627.1	A330043C09Rik-204	1300	No protein	-	lncRNA	-
ENSMUST00000139823.2	A330043C09Rik-201	1009	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000275629.1	A330043C09Rik-206	847	No protein	-	lncRNA	-
ENSMUST00000275631.1	A330043C09Rik-208	806	No protein	-	lncRNA	-
ENSMUST00000275630.1	A330043C09Rik-207	635	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,680 bps,

Version

ENSMUST00000275625.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000275625.1 A330043C09Rik-202

Summary

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Transcript: ENSMUST00000275625.1 A330043C09Rik-202

Summary

About Us

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