Transcript: ENSMUST00000271412.1

Description

novel transcript

Location

Chromosome 7: 11,230,947-11,238,618 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1142 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000125632.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000271399.1	-	1536	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000271412.1	-	2213	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271407.1	-	1507	No protein	-	lncRNA	-
ENSMUST00000271401.1	-	1506	No protein	-	lncRNA	-
ENSMUST00000271410.1	-	1440	No protein	-	lncRNA	-
ENSMUST00000271413.1	-	1438	No protein	-	lncRNA	-
ENSMUST00000271414.1	-	1413	No protein	-	lncRNA	-
ENSMUST00000271403.1	-	1284	No protein	-	lncRNA	-
ENSMUST00000271415.1	-	1259	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271408.1	-	1243	No protein	-	lncRNA	-
ENSMUST00000271404.1	-	1016	No protein	-	lncRNA	-
ENSMUST00000271402.1	-	936	No protein	-	lncRNA	-
ENSMUST00000271406.1	-	908	No protein	-	lncRNA	-
ENSMUST00000271400.1	-	864	No protein	-	lncRNA	-
ENSMUST00000271411.1	-	810	No protein	-	lncRNA	-
ENSMUST00000271418.1	-	706	No protein	-	lncRNA	-
ENSMUST00000271405.1	-	648	No protein	-	lncRNA	-
ENSMUST00000271419.1	-	562	No protein	-	lncRNA	-
ENSMUST00000271417.1	-	544	No protein	-	lncRNA	-
ENSMUST00000271409.1	-	540	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,213 bps,

Version

ENSMUST00000271412.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000271412.1

Summary

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Transcript: ENSMUST00000271412.1

Summary

About Us

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