Transcript: ENSMUST00000267940.1

Description

novel transcript, antisense to Scamp3 and Clk2 and Fam189b

Location

Chromosome 3: 89,086,879-89,091,583 reverse strand.

About this transcript

This transcript has 3 exons and is associated with 755 variant alleles.

Gene

This transcript is a product of gene ENSMUSG00000125093.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000267939.1	-	1003	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000267940.1	-	1052	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267941.1	-	905	No protein	-	lncRNA	-
ENSMUST00000267944.1	-	752	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267947.1	-	675	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267942.1	-	549	No protein	-	lncRNA	-
ENSMUST00000267945.1	-	486	No protein	-	lncRNA	-
ENSMUST00000267946.1	-	456	No protein	-	lncRNA	-
ENSMUST00000267948.1	-	427	No protein	-	lncRNA	-
ENSMUST00000267943.1	-	359	No protein	-	lncRNA	-
ENSMUST00000267949.1	-	305	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,052 bps,

Version

ENSMUST00000267940.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000267940.1

Summary

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Transcript: ENSMUST00000267940.1

Summary

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