Transcript: ENSMUST00000261823.1 Gm44210-213

Description

predicted gene, 44210 [Source:MGI Symbol;Acc:MGI:5690602]

Location

Chromosome 6: 87,706,134-87,708,412 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 655 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000108079.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000261813.1	Gm44210-203	668	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000261823.1	Gm44210-213	2164	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241469.2	Gm44210-202	2118	No protein	-	lncRNA	-
ENSMUST00000205253.4	Gm44210-201	2048	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000261821.1	Gm44210-211	2011	No protein	-	lncRNA	-
ENSMUST00000261822.1	Gm44210-212	1877	No protein	-	lncRNA	-
ENSMUST00000261820.1	Gm44210-210	1714	No protein	-	lncRNA	-
ENSMUST00000261818.1	Gm44210-208	1607	No protein	-	lncRNA	-
ENSMUST00000261817.1	Gm44210-207	1466	No protein	-	lncRNA	-
ENSMUST00000261825.1	Gm44210-215	1343	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261819.1	Gm44210-209	1058	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261815.1	Gm44210-205	1056	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261824.1	Gm44210-214	1032	No protein	-	lncRNA	-
ENSMUST00000261826.1	Gm44210-216	868	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261816.1	Gm44210-206	838	No protein	-	lncRNA	-
ENSMUST00000261814.1	Gm44210-204	790	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,164 bps,

Version

ENSMUST00000261823.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000261823.1 Gm44210-213

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Transcript: ENSMUST00000261823.1 Gm44210-213

Summary

About Us

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