Transcript: ENSMUST00000254499.1 Gm45442-204

Description

predicted gene 45442 [Source:MGI Symbol;Acc:MGI:5791278]

Location

Chromosome 7: 45,571,639-45,573,039 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 521 variant alleles and maps to 13 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000110208.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000254497.1	Gm45442-202	734	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254499.1	Gm45442-204	1401	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254504.1	Gm45442-209	746	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254503.1	Gm45442-208	689	No protein	-	lncRNA	-
ENSMUST00000254500.1	Gm45442-205	625	No protein	-	lncRNA	-
ENSMUST00000254502.1	Gm45442-207	468	No protein	-	lncRNA	-
ENSMUST00000210038.3	Gm45442-201	418	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000254498.1	Gm45442-203	327	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254501.1	Gm45442-206	291	No protein	-	lncRNA	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,401 bps,

Version

ENSMUST00000254499.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000254499.1 Gm45442-204

Summary

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Transcript: ENSMUST00000254499.1 Gm45442-204

Summary

About Us

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