Transcript: ENSMUST00000250309.1

Description

novel transcript, antisense to Depdc5

Location

Chromosome 5: 33,129,019-33,142,972 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1393 variant alleles and maps to 6 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000122023.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000250297.1	-	483	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000250309.1	-	1185	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250314.1	-	1103	No protein	-	lncRNA	-
ENSMUST00000250306.1	-	1027	No protein	-	lncRNA	-
ENSMUST00000250312.1	-	869	No protein	-	lncRNA	-
ENSMUST00000250299.1	-	766	No protein	-	lncRNA	-
ENSMUST00000250303.1	-	765	No protein	-	lncRNA	-
ENSMUST00000250315.1	-	723	No protein	-	lncRNA	-
ENSMUST00000250302.1	-	715	No protein	-	lncRNA	-
ENSMUST00000250308.1	-	653	No protein	-	lncRNA	-
ENSMUST00000250298.1	-	637	No protein	-	lncRNA	-
ENSMUST00000250305.1	-	612	No protein	-	lncRNA	-
ENSMUST00000250307.1	-	588	No protein	-	lncRNA	-
ENSMUST00000250313.1	-	563	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250300.1	-	500	No protein	-	lncRNA	-
ENSMUST00000250301.1	-	447	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,185 bps,

Version

ENSMUST00000250309.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000250309.1

Summary

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Transcript: ENSMUST00000250309.1

Summary

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