Transcript: ENSMUST00000246919.2 Gm38204-205

Description

predicted gene, 38204 [Source:MGI Symbol;Acc:MGI:5611432]

Location

Chromosome 1: 170,803,801-170,814,037 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1349 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000103676.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000340802.1	Gm38204-207	1288	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000246919.2	Gm38204-205	1365	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340807.1	Gm38204-212	1339	No protein	-	lncRNA	-
ENSMUST00000340803.1	Gm38204-208	1286	No protein	-	lncRNA	-
ENSMUST00000194503.3	Gm38204-201	1272	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000340805.1	Gm38204-210	1228	No protein	-	lncRNA	-
ENSMUST00000340809.1	Gm38204-213	1187	No protein	-	lncRNA	-
ENSMUST00000340812.1	Gm38204-216	1162	No protein	-	lncRNA	-
ENSMUST00000244575.2	Gm38204-203	1157	No protein	-	lncRNA	-
ENSMUST00000340817.1	Gm38204-221	1152	No protein	-	lncRNA	-
ENSMUST00000340811.1	Gm38204-215	1145	No protein	-	lncRNA	-
ENSMUST00000340821.1	Gm38204-225	1087	No protein	-	lncRNA	-
ENSMUST00000340804.1	Gm38204-209	1033	No protein	-	lncRNA	-
ENSMUST00000340816.1	Gm38204-220	945	No protein	-	lncRNA	-
ENSMUST00000340810.1	Gm38204-214	942	No protein	-	lncRNA	-
ENSMUST00000340822.1	Gm38204-226	660	No protein	-	lncRNA	-
ENSMUST00000340806.1	Gm38204-211	652	No protein	-	lncRNA	-
ENSMUST00000340814.1	Gm38204-218	635	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000194835.2	Gm38204-202	619	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000340813.1	Gm38204-217	600	No protein	-	lncRNA	-
ENSMUST00000246632.2	Gm38204-204	569	No protein	-	lncRNA	-
ENSMUST00000247291.2	Gm38204-206	559	No protein	-	lncRNA	-
ENSMUST00000340818.1	Gm38204-222	554	No protein	-	lncRNA	-
ENSMUST00000340815.1	Gm38204-219	385	No protein	-	lncRNA	-
ENSMUST00000340819.1	Gm38204-223	384	No protein	-	lncRNA	-
ENSMUST00000340820.1	Gm38204-224	383	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,365 bps,

Version

ENSMUST00000246919.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000246919.2 Gm38204-205

Summary

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Transcript: ENSMUST00000246919.2 Gm38204-205

Summary

About Us

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