Transcript: ENSMUST00000244427.2 Gm20513-203

Description

predicted gene 20513 [Source:MGI Symbol;Acc:MGI:5141978]

Location

Chromosome 17: 34,511,269-34,524,722 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2289 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000092415.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000236664.3	Gm20513-202	687	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000244427.2	Gm20513-203	1346	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000174074.4	Gm20513-201	1343	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000322314.1	Gm20513-216	1040	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322315.1	Gm20513-217	768	No protein	-	lncRNA	-
ENSMUST00000322302.1	Gm20513-204	670	No protein	-	lncRNA	-
ENSMUST00000322303.1	Gm20513-205	670	No protein	-	lncRNA	-
ENSMUST00000322316.1	Gm20513-218	665	No protein	-	lncRNA	-
ENSMUST00000322308.1	Gm20513-210	656	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322304.1	Gm20513-206	603	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322305.1	Gm20513-207	575	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322307.1	Gm20513-209	561	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322306.1	Gm20513-208	560	No protein	-	lncRNA	-
ENSMUST00000322309.1	Gm20513-211	487	No protein	-	lncRNA	-
ENSMUST00000322317.1	Gm20513-219	461	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322310.1	Gm20513-212	428	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322312.1	Gm20513-214	412	No protein	-	lncRNA	-
ENSMUST00000322311.1	Gm20513-213	383	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322318.1	Gm20513-220	302	No protein	-	lncRNA	-
ENSMUST00000322313.1	Gm20513-215	281	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,346 bps,

Version

ENSMUST00000244427.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000244427.2 Gm20513-203

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Transcript: ENSMUST00000244427.2 Gm20513-203

Summary

About Us

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