Transcript: ENSMUST00000244166.2 Gm47790-205

Description

predicted gene, 47790 [Source:MGI Symbol;Acc:MGI:6096959]

Location

Chromosome 9: 77,613,707-77,615,187 reverse strand.

About this transcript

This transcript has 1 exon and is associated with 561 variant alleles.

Gene

This transcript is a product of gene ENSMUSG00000111225.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000244948.2	Gm47790-206	452	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000244166.2	Gm47790-205	1481	No protein	-	lncRNA	-
ENSMUST00000311584.1	Gm47790-215	1293	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241840.2	Gm47790-203	698	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000214443.4	Gm47790-201	661	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000311585.1	Gm47790-216	661	No protein	-	lncRNA	-
ENSMUST00000311578.1	Gm47790-209	631	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000311581.1	Gm47790-212	602	No protein	-	lncRNA	-
ENSMUST00000311577.1	Gm47790-208	563	No protein	-	lncRNA	-
ENSMUST00000311576.1	Gm47790-207	520	No protein	-	lncRNA	-
ENSMUST00000311579.1	Gm47790-210	437	No protein	-	lncRNA	-
ENSMUST00000311582.1	Gm47790-213	406	No protein	-	lncRNA	-
ENSMUST00000215521.2	Gm47790-202	399	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000311580.1	Gm47790-211	353	No protein	-	lncRNA	-
ENSMUST00000242363.2	Gm47790-204	317	No protein	-	lncRNA	-
ENSMUST00000311583.1	Gm47790-214	298	No protein	-	lncRNA	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,481 bps,

Version

ENSMUST00000244166.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000244166.2 Gm47790-205

Summary

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Transcript: ENSMUST00000244166.2 Gm47790-205

Summary

About Us

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