Transcript: ENSMUST00000243920.2 Gm33474-204

Description

predicted gene, 33474 [Source:MGI Symbol;Acc:MGI:5592633]

Gene Synonyms

Gm43419

Location

Chromosome 5: 107,203,006-107,204,850 forward strand.

About this transcript

This transcript has 1 exon, is associated with 544 variant alleles and maps to 6 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000106554.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000271358.1	Gm33474-205	1495	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243920.2	Gm33474-204	1845	No protein	-	lncRNA	-
ENSMUST00000243509.2	Gm33474-203	1457	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000199486.2	Gm33474-201	1231	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000271362.1	Gm33474-209	1094	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271360.1	Gm33474-207	998	No protein	-	lncRNA	-
ENSMUST00000271371.1	Gm33474-218	997	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271359.1	Gm33474-206	945	No protein	-	lncRNA	-
ENSMUST00000271368.1	Gm33474-215	867	No protein	-	lncRNA	-
ENSMUST00000271361.1	Gm33474-208	839	No protein	-	lncRNA	-
ENSMUST00000271366.1	Gm33474-213	814	No protein	-	lncRNA	-
ENSMUST00000271367.1	Gm33474-214	781	No protein	-	lncRNA	-
ENSMUST00000271365.1	Gm33474-212	732	No protein	-	lncRNA	-
ENSMUST00000271372.1	Gm33474-219	695	No protein	-	lncRNA	-
ENSMUST00000271370.1	Gm33474-217	690	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271373.1	Gm33474-220	617	No protein	-	lncRNA	-
ENSMUST00000271369.1	Gm33474-216	555	No protein	-	lncRNA	-
ENSMUST00000242071.2	Gm33474-202	481	No protein	-	lncRNA	-
ENSMUST00000271363.1	Gm33474-210	460	No protein	-	lncRNA	-
ENSMUST00000271374.1	Gm33474-221	368	No protein	-	lncRNA	-
ENSMUST00000271364.1	Gm33474-211	231	No protein	-	lncRNA	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,845 bps,

Version

ENSMUST00000243920.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000243920.2 Gm33474-204

Summary

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Transcript: ENSMUST00000243920.2 Gm33474-204

Summary

About Us

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